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Cluster: BF223_10_sub_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_45240 k141_45240_12 15214 16110 + 3.A.1.4.10
TC k141_45240 k141_45240_13 16114 17187 + 3.A.1.4.10
TC k141_45240 k141_45240_14 17180 17959 + 3.A.1.4.10
TC k141_45240 k141_45240_15 17949 18662 + 3.A.1.4.10
pfam k141_45240 k141_45240_16 18963 19982 + PNP_UDP_1 | NUP
TC k141_45240 k141_45240_17 20213 21022 - 3.A.1.34.1
TC k141_45240 k141_45240_18 21015 21938 - 3.A.1.34.1
pfam k141_45240 k141_45240_19 22020 22952 - ABC_sub_bind
CAZyme k141_45240 k141_45240_20 23436 24452 - GT2
NULL(UNKNOWN) k141_45240 k141_45240_21 24485 25213 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_45240 k141_45240_22 25354 27747 - GH3
Gene ID: k141_45240_12
Type: TC
Location: 15214 - 16110 (+)
Gene ID: k141_45240_13
Type: TC
Location: 16114 - 17187 (+)
Gene ID: k141_45240_14
Type: TC
Location: 17180 - 17959 (+)
Gene ID: k141_45240_15
Type: TC
Location: 17949 - 18662 (+)
Gene ID: k141_45240_16
Type: pfam
Location: 18963 - 19982 (+)
Gene ID: k141_45240_17
Type: TC
Location: 20213 - 21022 (-)
Gene ID: k141_45240_18
Type: TC
Location: 21015 - 21938 (-)
Gene ID: k141_45240_19
Type: pfam
Location: 22020 - 22952 (-)
Gene ID: k141_45240_20
Type: CAZyme
Location: 23436 - 24452 (-)
Gene ID: k141_45240_21
Type:
Location: 24485 - 25213 (-)
Gene ID: k141_45240_22
Type: CAZyme
Location: 25354 - 27747 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_45240_21 vegan > omnivore 1.01870 0.04238
k141_45240_22 vegetarian > omnivore 1.26848 0.04972
k141_45240_22 vegetarian > vegan 1.25611 0.02258

🧭 Explore Read Mapping of CGC

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