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Cluster: BF223_10_sub_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_3528 k141_3528_9 10940 12034 - GT2
pfam k141_3528 k141_3528_10 12139 12936 + Collagen | Collagen
pfam k141_3528 k141_3528_11 13926 14870 + Zn_dep_PLPC
TC k141_3528 k141_3528_12 15223 15786 + 3.A.1.26.9
Gene ID: k141_3528_9
Type: CAZyme
Location: 10940 - 12034 (-)
Gene ID: k141_3528_10
Type: pfam
Location: 12139 - 12936 (+)
Gene ID: k141_3528_11
Type: pfam
Location: 13926 - 14870 (+)
Gene ID: k141_3528_12
Type: TC
Location: 15223 - 15786 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_3528_10 vegan > omnivore 1.34801 0.04238
k141_3528_12 vegetarian > omnivore 1.07705 0.04972

🧭 Explore Read Mapping of CGC

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