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Cluster: BF223_10_sub_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42494 k141_42494_16 15281 16525 + 3.A.1.1.40
TC k141_42494 k141_42494_17 16694 17632 + 3.A.1.1.20
TC k141_42494 k141_42494_18 17648 18517 + 3.A.1.1.39
CAZyme k141_42494 k141_42494_19 18524 20329 + PL33_1
CAZyme k141_42494 k141_42494_20 20449 22269 + GH154
CAZyme k141_42494 k141_42494_21 22253 23374 + GH88
Gene ID: k141_42494_16
Type: TC
Location: 15281 - 16525 (+)
Gene ID: k141_42494_17
Type: TC
Location: 16694 - 17632 (+)
Gene ID: k141_42494_18
Type: TC
Location: 17648 - 18517 (+)
Gene ID: k141_42494_19
Type: CAZyme
Location: 18524 - 20329 (+)
Gene ID: k141_42494_20
Type: CAZyme
Location: 20449 - 22269 (+)
Gene ID: k141_42494_21
Type: CAZyme
Location: 22253 - 23374 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_42494_17 vegan > omnivore 1.70692 0.04238
k141_42494_18 vegetarian > omnivore 1.09678 0.04972
k141_42494_18 vegetarian > vegan 1.03677 0.02258
k141_42494_19 vegan > omnivore 1.04439 0.04238
k141_42494_20 vegan > omnivore 1.13103 0.04238
k141_42494_21 vegan > omnivore 1.56918 0.04238

🧭 Explore Read Mapping of CGC

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