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Cluster: BF223_10_sub_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_57106 k141_57106_43 46010 47551 - 3.A.1.120.1
TF k141_57106 k141_57106_44 48039 48536 + MarR
TC k141_57106 k141_57106_45 48529 50331 + 3.A.1.135.5
TC k141_57106 k141_57106_46 50334 52235 + 3.A.1.135.5
NULL(UNKNOWN) k141_57106 k141_57106_47 52927 53484 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_57106 k141_57106_48 53471 54418 + HTH_AraC | HTH_AraC
TC k141_57106 k141_57106_49 54634 55887 + 3.A.1.1.4
TC k141_57106 k141_57106_50 55987 56901 + 3.A.1.1.4
TC k141_57106 k141_57106_51 56898 57722 + 3.A.1.1.4
CAZyme k141_57106 k141_57106_52 57808 60855 + GH2
Gene ID: k141_57106_43
Type: TC
Location: 46010 - 47551 (-)
Gene ID: k141_57106_44
Type: TF
Location: 48039 - 48536 (+)
Gene ID: k141_57106_45
Type: TC
Location: 48529 - 50331 (+)
Gene ID: k141_57106_46
Type: TC
Location: 50334 - 52235 (+)
Gene ID: k141_57106_47
Type:
Location: 52927 - 53484 (+)
Gene ID: k141_57106_48
Type: TF
Location: 53471 - 54418 (+)
Gene ID: k141_57106_49
Type: TC
Location: 54634 - 55887 (+)
Gene ID: k141_57106_50
Type: TC
Location: 55987 - 56901 (+)
Gene ID: k141_57106_51
Type: TC
Location: 56898 - 57722 (+)
Gene ID: k141_57106_52
Type: CAZyme
Location: 57808 - 60855 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_57106_43 vegan > omnivore 1.10109 0.04238

🧭 Explore Read Mapping of CGC

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