dbCAN Logo

Cluster: BF223_10_sub_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_89096 k141_89096_16 16107 17537 - 2.A.50.2.1
TC k141_89096 k141_89096_17 18176 19297 + 3.A.1.4.10
TC k141_89096 k141_89096_18 19681 20565 + 3.A.1.4.10
TC k141_89096 k141_89096_19 20576 21619 + 3.A.1.4.8
TC k141_89096 k141_89096_20 21616 22473 + 3.A.1.4.10
TC k141_89096 k141_89096_21 22477 23181 + 3.A.1.4.10
pfam k141_89096 k141_89096_22 23526 24440 - AP_endonuc_2
STP k141_89096 k141_89096_23 24763 25698 + Peripla_BP_1
TC k141_89096 k141_89096_24 25798 27276 + 3.A.1.2.20
TC k141_89096 k141_89096_25 27302 28339 + 3.A.1.2.15
CAZyme k141_89096 k141_89096_26 28355 29395 + GH179
Gene ID: k141_89096_16
Type: TC
Location: 16107 - 17537 (-)
Gene ID: k141_89096_17
Type: TC
Location: 18176 - 19297 (+)
Gene ID: k141_89096_18
Type: TC
Location: 19681 - 20565 (+)
Gene ID: k141_89096_19
Type: TC
Location: 20576 - 21619 (+)
Gene ID: k141_89096_20
Type: TC
Location: 21616 - 22473 (+)
Gene ID: k141_89096_21
Type: TC
Location: 22477 - 23181 (+)
Gene ID: k141_89096_22
Type: pfam
Location: 23526 - 24440 (-)
Gene ID: k141_89096_23
Type: STP
Location: 24763 - 25698 (+)
Gene ID: k141_89096_24
Type: TC
Location: 25798 - 27276 (+)
Gene ID: k141_89096_25
Type: TC
Location: 27302 - 28339 (+)
Gene ID: k141_89096_26
Type: CAZyme
Location: 28355 - 29395 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_89096_16 vegan > omnivore 1.00012 0.04238

🧭 Explore Read Mapping of CGC

← Back to Cluster List