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Cluster: BF221_bin.9_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_206747 k141_206747_18 21047 23176 - GH3
TF k141_206747 k141_206747_19 23367 24260 + HTH_AraC | HTH_AraC
CAZyme k141_206747 k141_206747_20 24350 25801 + GH43_35
pfam k141_206747 k141_206747_21 25978 26301 + Trns_repr_metal
TC k141_206747 k141_206747_22 26417 29344 + 3.A.3.5.15
TC k141_206747 k141_206747_23 29907 32507 + 3.A.9.1.2
pfam k141_206747 k141_206747_24 32735 32887 + DUF4250
pfam k141_206747 k141_206747_25 32880 34115 + RACo_C_ter | RACo_C_ter | Raco_middle
TC k141_206747 k141_206747_26 34282 36495 + 1.B.52.2.2
Gene ID: k141_206747_18
Type: CAZyme
Location: 21047 - 23176 (-)
Gene ID: k141_206747_19
Type: TF
Location: 23367 - 24260 (+)
Gene ID: k141_206747_20
Type: CAZyme
Location: 24350 - 25801 (+)
Gene ID: k141_206747_21
Type: pfam
Location: 25978 - 26301 (+)
Gene ID: k141_206747_22
Type: TC
Location: 26417 - 29344 (+)
Gene ID: k141_206747_23
Type: TC
Location: 29907 - 32507 (+)
Gene ID: k141_206747_24
Type: pfam
Location: 32735 - 32887 (+)
Gene ID: k141_206747_25
Type: pfam
Location: 32880 - 34115 (+)
Gene ID: k141_206747_26
Type: TC
Location: 34282 - 36495 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_206747_21 vegetarian > vegan 1.25777 0.00082

🧭 Explore Read Mapping of CGC

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