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Cluster: BF221_bin.9_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_53794 k141_53794_3 1252 3540 - GH3
TF k141_53794 k141_53794_4 3749 4567 + HTH_AraC
TF k141_53794 k141_53794_5 4498 5406 - HTH_AraC | HTH_AraC
CAZyme k141_53794 k141_53794_6 5454 7601 - GH3
CAZyme k141_53794 k141_53794_7 7684 8829 - GH8
TC k141_53794 k141_53794_8 8939 9838 - 3.A.1.1.29
TC k141_53794 k141_53794_9 9859 10815 - 3.A.1.1.29
TC k141_53794 k141_53794_10 10892 12598 - 3.A.1.1.29
TF k141_53794 k141_53794_11 12738 14333 - HTH_AraC | HTH_AraC
TC k141_53794 k141_53794_12 14327 16183 - 8.A.59.2.1
CAZyme k141_53794 k141_53794_13 16258 17817 - CBM91 | GH43_12
CAZyme k141_53794 k141_53794_14 17838 19571 - CE17
CAZyme k141_53794 k141_53794_15 19702 21681 - CE1
Gene ID: k141_53794_3
Type: CAZyme
Location: 1252 - 3540 (-)
Gene ID: k141_53794_4
Type: TF
Location: 3749 - 4567 (+)
Gene ID: k141_53794_5
Type: TF
Location: 4498 - 5406 (-)
Gene ID: k141_53794_6
Type: CAZyme
Location: 5454 - 7601 (-)
Gene ID: k141_53794_7
Type: CAZyme
Location: 7684 - 8829 (-)
Gene ID: k141_53794_8
Type: TC
Location: 8939 - 9838 (-)
Gene ID: k141_53794_9
Type: TC
Location: 9859 - 10815 (-)
Gene ID: k141_53794_10
Type: TC
Location: 10892 - 12598 (-)
Gene ID: k141_53794_11
Type: TF
Location: 12738 - 14333 (-)
Gene ID: k141_53794_12
Type: TC
Location: 14327 - 16183 (-)
Gene ID: k141_53794_13
Type: CAZyme
Location: 16258 - 17817 (-)
Gene ID: k141_53794_14
Type: CAZyme
Location: 17838 - 19571 (-)
Gene ID: k141_53794_15
Type: CAZyme
Location: 19702 - 21681 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_53794_4 vegetarian > vegan 1.06845 0.00082

🧭 Explore Read Mapping of CGC

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