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Cluster: BF221_bin.60_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_260720 k141_260720_5 1581 3758 + 9.A.8.1.6
TC k141_260720 k141_260720_6 4298 5338 + 3.A.1.34.1
TC k141_260720 k141_260720_7 5356 6240 + 3.A.1.34.1
TC k141_260720 k141_260720_8 6233 7006 + 3.A.1.34.1
TF k141_260720 k141_260720_9 7148 8176 + LacI
CAZyme k141_260720 k141_260720_10 8538 9542 + GH177
pfam k141_260720 k141_260720_11 9643 10476 + AP_endonuc_2
TC k141_260720 k141_260720_12 10568 12649 + 2.A.2.3.3
Gene ID: k141_260720_5
Type: TC
Location: 1581 - 3758 (+)
Gene ID: k141_260720_6
Type: TC
Location: 4298 - 5338 (+)
Gene ID: k141_260720_7
Type: TC
Location: 5356 - 6240 (+)
Gene ID: k141_260720_8
Type: TC
Location: 6233 - 7006 (+)
Gene ID: k141_260720_9
Type: TF
Location: 7148 - 8176 (+)
Gene ID: k141_260720_10
Type: CAZyme
Location: 8538 - 9542 (+)
Gene ID: k141_260720_11
Type: pfam
Location: 9643 - 10476 (+)
Gene ID: k141_260720_12
Type: TC
Location: 10568 - 12649 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_260720_10 vegan > omnivore 1.51675 0.02745

🧭 Explore Read Mapping of CGC

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