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Cluster: BF220_bin.60_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_293951 k141_293951_17 14556 15725 - CE9
STP k141_293951 k141_293951_18 15843 17009 - SIS | SIS
TF k141_293951 k141_293951_19 17124 17855 - GntR
TC k141_293951 k141_293951_20 18040 19122 - 4.A.6.1.4
TC k141_293951 k141_293951_21 19112 19912 - 4.A.6.1.4
TC k141_293951 k141_293951_22 20000 20482 - 4.A.6.1.4
pfam k141_293951 k141_293951_23 20519 20800 - YajC
TC k141_293951 k141_293951_24 20800 21243 - 4.A.6.1.16
Gene ID: k141_293951_17
Type: CAZyme
Location: 14556 - 15725 (-)
Gene ID: k141_293951_18
Type: STP
Location: 15843 - 17009 (-)
Gene ID: k141_293951_19
Type: TF
Location: 17124 - 17855 (-)
Gene ID: k141_293951_20
Type: TC
Location: 18040 - 19122 (-)
Gene ID: k141_293951_21
Type: TC
Location: 19112 - 19912 (-)
Gene ID: k141_293951_22
Type: TC
Location: 20000 - 20482 (-)
Gene ID: k141_293951_23
Type: pfam
Location: 20519 - 20800 (-)
Gene ID: k141_293951_24
Type: TC
Location: 20800 - 21243 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_293951_23 vegan > omnivore 1.10888 0.01057

🧭 Explore Read Mapping of CGC

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