Cluster: BF220_bin.60_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: BF220_bin.60
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_32527 | k141_32527_6 | 5639 | 7081 | + | 3.A.1.8.1 |
| TC | k141_32527 | k141_32527_7 | 7085 | 8155 | + | 3.A.1.1.3 |
| pfam | k141_32527 | k141_32527_8 | 8606 | 9889 | + | HGD-D |
| TC | k141_32527 | k141_32527_9 | 10195 | 11808 | + | 3.A.1.5.11 |
| TC | k141_32527 | k141_32527_10 | 11895 | 12848 | + | 3.A.1.5.11 |
| TC | k141_32527 | k141_32527_11 | 12848 | 13675 | + | 3.A.1.5.39 |
| TC | k141_32527 | k141_32527_12 | 13679 | 14677 | + | 3.A.1.5.35 |
| TC | k141_32527 | k141_32527_13 | 14664 | 15449 | + | 3.A.1.5.36 |
| pfam | k141_32527 | k141_32527_14 | 15528 | 16691 | + | HGD-D |
| pfam | k141_32527 | k141_32527_15 | 16743 | 17507 | + | BcrAD_BadFG |
| CAZyme | k141_32527 | k141_32527_16 | 17521 | 18753 | + | GT4 |
Gene ID: k141_32527_6
Type: TC
Location: 5639 - 7081 (+)
Type: TC
Location: 5639 - 7081 (+)
Gene ID: k141_32527_7
Type: TC
Location: 7085 - 8155 (+)
Type: TC
Location: 7085 - 8155 (+)
Gene ID: k141_32527_8
Type: pfam
Location: 8606 - 9889 (+)
Type: pfam
Location: 8606 - 9889 (+)
Gene ID: k141_32527_9
Type: TC
Location: 10195 - 11808 (+)
Type: TC
Location: 10195 - 11808 (+)
Gene ID: k141_32527_10
Type: TC
Location: 11895 - 12848 (+)
Type: TC
Location: 11895 - 12848 (+)
Gene ID: k141_32527_11
Type: TC
Location: 12848 - 13675 (+)
Type: TC
Location: 12848 - 13675 (+)
Gene ID: k141_32527_12
Type: TC
Location: 13679 - 14677 (+)
Type: TC
Location: 13679 - 14677 (+)
Gene ID: k141_32527_13
Type: TC
Location: 14664 - 15449 (+)
Type: TC
Location: 14664 - 15449 (+)
Gene ID: k141_32527_14
Type: pfam
Location: 15528 - 16691 (+)
Type: pfam
Location: 15528 - 16691 (+)
Gene ID: k141_32527_15
Type: pfam
Location: 16743 - 17507 (+)
Type: pfam
Location: 16743 - 17507 (+)
Gene ID: k141_32527_16
Type: CAZyme
Location: 17521 - 18753 (+)
Type: CAZyme
Location: 17521 - 18753 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_32527_9 | vegan > omnivore | 4.28758 | 0.01057 |
| k141_32527_10 | vegan > omnivore | 2.98943 | 0.01057 |
| k141_32527_11 | vegan > omnivore | 3.14581 | 0.01057 |
| k141_32527_13 | vegan > omnivore | 2.39132 | 0.01057 |