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Cluster: BF200_bin.9_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_76784 k141_76784_32 38866 40374 + 3.A.1.2.3
TC k141_76784 k141_76784_33 40392 42044 + 3.A.1.2.3
TF k141_76784 k141_76784_34 42180 43823 + HTH_AraC | HTH_AraC
TC k141_76784 k141_76784_35 43844 45721 + 8.A.59.2.1
STP k141_76784 k141_76784_36 45708 46661 + Peripla_BP_1
TC k141_76784 k141_76784_37 46654 47688 + 3.A.1.2.3
pfam k141_76784 k141_76784_38 47703 48257 + DUF6553
CAZyme k141_76784 k141_76784_39 48485 51931 + CBM92 | CBM92 | CBM92 | CBM92 | GH5_54
CAZyme k141_76784 k141_76784_40 52075 59457 + CBM32 | CBM32 | CBM32 | CBM32 | CBM6 | CBM6
NULL(UNKNOWN) k141_76784 k141_76784_41 59478 59660 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_76784 k141_76784_42 59702 62476 + GH5_54
Gene ID: k141_76784_32
Type: TC
Location: 38866 - 40374 (+)
Gene ID: k141_76784_33
Type: TC
Location: 40392 - 42044 (+)
Gene ID: k141_76784_34
Type: TF
Location: 42180 - 43823 (+)
Gene ID: k141_76784_35
Type: TC
Location: 43844 - 45721 (+)
Gene ID: k141_76784_36
Type: STP
Location: 45708 - 46661 (+)
Gene ID: k141_76784_37
Type: TC
Location: 46654 - 47688 (+)
Gene ID: k141_76784_38
Type: pfam
Location: 47703 - 48257 (+)
Gene ID: k141_76784_39
Type: CAZyme
Location: 48485 - 51931 (+)
Gene ID: k141_76784_40
Type: CAZyme
Location: 52075 - 59457 (+)
Gene ID: k141_76784_41
Type:
Location: 59478 - 59660 (+)
Gene ID: k141_76784_42
Type: CAZyme
Location: 59702 - 62476 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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