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Cluster: BF200_bin.9_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_59888 k141_59888_54 49291 50142 + 3.A.1.7.5
TC k141_59888 k141_59888_55 50144 51085 + 3.A.1.7.5
TC k141_59888 k141_59888_56 51089 51838 + 3.A.1.7.1
pfam k141_59888 k141_59888_57 51843 52508 + PhoU | PhoU
TF k141_59888 k141_59888_58 52621 53283 + Trans_reg_C
TC k141_59888 k141_59888_59 53293 55041 + 2.A.58.2.2
pfam k141_59888 k141_59888_60 55402 56394 - Peptidase_C39 | Peptidase_C70 | Peptidase_C39_2
pfam k141_59888 k141_59888_61 56573 57421 - Patatin | DUF6363
CAZyme k141_59888 k141_59888_62 57551 58345 - CE4
pfam k141_59888 k141_59888_63 58457 59518 + Acyl_transf_3
TC k141_59888 k141_59888_64 59568 61160 + 9.B.142.3.8
pfam k141_59888 k141_59888_65 61135 61587 + GtrA_DPMS_TM
STP k141_59888 k141_59888_66 61618 61866 + HMA
TC k141_59888 k141_59888_67 61920 64271 + 9.A.8.1.6
Gene ID: k141_59888_54
Type: TC
Location: 49291 - 50142 (+)
Gene ID: k141_59888_55
Type: TC
Location: 50144 - 51085 (+)
Gene ID: k141_59888_56
Type: TC
Location: 51089 - 51838 (+)
Gene ID: k141_59888_57
Type: pfam
Location: 51843 - 52508 (+)
Gene ID: k141_59888_58
Type: TF
Location: 52621 - 53283 (+)
Gene ID: k141_59888_59
Type: TC
Location: 53293 - 55041 (+)
Gene ID: k141_59888_60
Type: pfam
Location: 55402 - 56394 (-)
Gene ID: k141_59888_61
Type: pfam
Location: 56573 - 57421 (-)
Gene ID: k141_59888_62
Type: CAZyme
Location: 57551 - 58345 (-)
Gene ID: k141_59888_63
Type: pfam
Location: 58457 - 59518 (+)
Gene ID: k141_59888_64
Type: TC
Location: 59568 - 61160 (+)
Gene ID: k141_59888_65
Type: pfam
Location: 61135 - 61587 (+)
Gene ID: k141_59888_66
Type: STP
Location: 61618 - 61866 (+)
Gene ID: k141_59888_67
Type: TC
Location: 61920 - 64271 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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