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Cluster: BF186_47_sub_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_253068 k141_253068_5 3544 4866 - 3.D.2.2.1
TC k141_253068 k141_253068_6 4859 5152 - 3.D.2.2.1
TC k141_253068 k141_253068_7 5154 6155 - 3.D.2.2.1
TC k141_253068 k141_253068_8 6240 6776 + 2.A.51.1.6
TC k141_253068 k141_253068_9 6773 7291 + 2.A.51.1.6
STP k141_253068 k141_253068_10 7356 8378 + PfkB
TC k141_253068 k141_253068_11 8537 9175 - 9.B.186.1.1
pfam k141_253068 k141_253068_12 9186 11825 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
NULL(UNKNOWN) k141_253068 k141_253068_13 11902 12261 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_253068 k141_253068_14 12337 13692 - 1.B.17.1.5
CAZyme k141_253068 k141_253068_15 13872 16346 + GT35
Gene ID: k141_253068_5
Type: TC
Location: 3544 - 4866 (-)
Gene ID: k141_253068_6
Type: TC
Location: 4859 - 5152 (-)
Gene ID: k141_253068_7
Type: TC
Location: 5154 - 6155 (-)
Gene ID: k141_253068_8
Type: TC
Location: 6240 - 6776 (+)
Gene ID: k141_253068_9
Type: TC
Location: 6773 - 7291 (+)
Gene ID: k141_253068_10
Type: STP
Location: 7356 - 8378 (+)
Gene ID: k141_253068_11
Type: TC
Location: 8537 - 9175 (-)
Gene ID: k141_253068_12
Type: pfam
Location: 9186 - 11825 (-)
Gene ID: k141_253068_13
Type:
Location: 11902 - 12261 (-)
Gene ID: k141_253068_14
Type: TC
Location: 12337 - 13692 (-)
Gene ID: k141_253068_15
Type: CAZyme
Location: 13872 - 16346 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Alphaproteobacteria
→
Order
RF32
→
Family
CAG-239
→
Genus
RUG410
→
Species
RUG410 sp934277545

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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