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Cluster: BF184_6_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_232583 k141_232583_42 52622 54100 - GH77
CAZyme k141_232583 k141_232583_43 54118 55743 - GH13_36
TC k141_232583 k141_232583_44 55842 56711 - 3.A.1.1.27
TC k141_232583 k141_232583_45 56711 58090 - 3.A.1.1.27
pfam k141_232583 k141_232583_46 58287 59642 - SBP_bac_8
TF k141_232583 k141_232583_47 59977 60984 + LacI
CAZyme k141_232583 k141_232583_48 61119 62207 - GH53
Gene ID: k141_232583_42
Type: CAZyme
Location: 52622 - 54100 (-)
Gene ID: k141_232583_43
Type: CAZyme
Location: 54118 - 55743 (-)
Gene ID: k141_232583_44
Type: TC
Location: 55842 - 56711 (-)
Gene ID: k141_232583_45
Type: TC
Location: 56711 - 58090 (-)
Gene ID: k141_232583_46
Type: pfam
Location: 58287 - 59642 (-)
Gene ID: k141_232583_47
Type: TF
Location: 59977 - 60984 (+)
Gene ID: k141_232583_48
Type: CAZyme
Location: 61119 - 62207 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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