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Cluster: BF184_6_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_416449 k141_416449_209 237387 240185 - GH5_4
TC k141_416449 k141_416449_210 240185 240805 - 9.B.28.1.2
pfam k141_416449 k141_416449_211 240893 242605 - SBP_bac_1
TC k141_416449 k141_416449_212 242667 243629 - 3.A.1.1.29
TC k141_416449 k141_416449_213 243641 245092 - 3.A.1.1.29
NULL(UNKNOWN) k141_416449 k141_416449_214 245305 247128 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_416449 k141_416449_215 247280 249088 - 8.A.59.2.1
CAZyme k141_416449 k141_416449_216 249291 251585 + GH31_3
TC k141_416449 k141_416449_217 251698 255045 - 3.A.17.1.1
Gene ID: k141_416449_209
Type: CAZyme
Location: 237387 - 240185 (-)
Gene ID: k141_416449_210
Type: TC
Location: 240185 - 240805 (-)
Gene ID: k141_416449_211
Type: pfam
Location: 240893 - 242605 (-)
Gene ID: k141_416449_212
Type: TC
Location: 242667 - 243629 (-)
Gene ID: k141_416449_213
Type: TC
Location: 243641 - 245092 (-)
Gene ID: k141_416449_214
Type:
Location: 245305 - 247128 (-)
Gene ID: k141_416449_215
Type: TC
Location: 247280 - 249088 (-)
Gene ID: k141_416449_216
Type: CAZyme
Location: 249291 - 251585 (+)
Gene ID: k141_416449_217
Type: TC
Location: 251698 - 255045 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_416449_217 vegan > omnivore 1.65471 0.01057

🧭 Explore Read Mapping of CGC

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