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Cluster: BF162_bin.9_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_519832 k141_519832_13 12997 14469 - GH51_1
TC k141_519832 k141_519832_14 14730 16508 - 1.B.52.2.2
TC k141_519832 k141_519832_15 16617 17807 - 3.A.1.2.5
TC k141_519832 k141_519832_16 17804 19348 - 3.A.1.2.5
TC k141_519832 k141_519832_17 19511 20671 - 3.A.1.2.5
TC k141_519832 k141_519832_18 20878 21927 - 3.A.1.2.26
TF k141_519832 k141_519832_19 21924 23528 - HTH_AraC | HTH_AraC
TC k141_519832 k141_519832_20 23521 25023 - 8.A.59.2.1
pfam k141_519832 k141_519832_21 25007 26047 - Peripla_BP_4
CAZyme k141_519832 k141_519832_22 26404 27294 - CE4
pfam k141_519832 k141_519832_23 27593 28753 - SBF | Mem_trans
pfam k141_519832 k141_519832_24 28747 29481 - YlmH_RBD
CAZyme k141_519832 k141_519832_25 29927 31834 + GH2
TC k141_519832 k141_519832_26 31917 33287 - 2.A.66.1.33
Gene ID: k141_519832_13
Type: CAZyme
Location: 12997 - 14469 (-)
Gene ID: k141_519832_14
Type: TC
Location: 14730 - 16508 (-)
Gene ID: k141_519832_15
Type: TC
Location: 16617 - 17807 (-)
Gene ID: k141_519832_16
Type: TC
Location: 17804 - 19348 (-)
Gene ID: k141_519832_17
Type: TC
Location: 19511 - 20671 (-)
Gene ID: k141_519832_18
Type: TC
Location: 20878 - 21927 (-)
Gene ID: k141_519832_19
Type: TF
Location: 21924 - 23528 (-)
Gene ID: k141_519832_20
Type: TC
Location: 23521 - 25023 (-)
Gene ID: k141_519832_21
Type: pfam
Location: 25007 - 26047 (-)
Gene ID: k141_519832_22
Type: CAZyme
Location: 26404 - 27294 (-)
Gene ID: k141_519832_23
Type: pfam
Location: 27593 - 28753 (-)
Gene ID: k141_519832_24
Type: pfam
Location: 28747 - 29481 (-)
Gene ID: k141_519832_25
Type: CAZyme
Location: 29927 - 31834 (+)
Gene ID: k141_519832_26
Type: TC
Location: 31917 - 33287 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_519832_22 vegetarian > omnivore 1.34926 0.00567
k141_519832_22 vegetarian > vegan 1.59720 0.00266
k141_519832_23 vegetarian > omnivore 1.15674 0.00567
k141_519832_23 vegetarian > vegan 2.54111 0.00266
k141_519832_24 vegetarian > vegan 3.45599 0.00266
k141_519832_25 vegetarian > omnivore 1.05839 0.00567
k141_519832_25 vegetarian > vegan 1.45283 0.00266

🧭 Explore Read Mapping of CGC

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