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Cluster: BF162_bin.9_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_229855 k141_229855_18 18745 19080 + 2.A.7.33.5
NULL(UNKNOWN) k141_229855 k141_229855_19 19064 19372 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_229855 k141_229855_20 19701 22331 + GH25
pfam k141_229855 k141_229855_21 22602 24251 + SBP_bac_8
pfam k141_229855 k141_229855_22 24288 24758 + EamA | DMT_YdcZ
TC k141_229855 k141_229855_23 24839 25681 + 3.A.11.1.1
Gene ID: k141_229855_18
Type: TC
Location: 18745 - 19080 (+)
Gene ID: k141_229855_19
Type:
Location: 19064 - 19372 (-)
Gene ID: k141_229855_20
Type: CAZyme
Location: 19701 - 22331 (+)
Gene ID: k141_229855_21
Type: pfam
Location: 22602 - 24251 (+)
Gene ID: k141_229855_22
Type: pfam
Location: 24288 - 24758 (+)
Gene ID: k141_229855_23
Type: TC
Location: 24839 - 25681 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_229855_18 vegetarian > omnivore 1.04249 0.00567
k141_229855_18 vegetarian > vegan 2.67272 0.00266
k141_229855_19 vegetarian > vegan 2.19731 0.00266
k141_229855_20 vegetarian > omnivore 1.53457 0.00567
k141_229855_20 vegetarian > vegan 1.33021 0.00266
k141_229855_22 vegetarian > omnivore 1.35026 0.00567
k141_229855_22 vegetarian > vegan 1.78563 0.00266
k141_229855_23 vegetarian > omnivore 1.25778 0.00567
k141_229855_23 vegetarian > vegan 1.83380 0.00266

🧭 Explore Read Mapping of CGC

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