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Cluster: BF162_bin.9_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_287723 k141_287723_1 876 2255 + 2.A.66.1.32
NULL(UNKNOWN) k141_287723 k141_287723_2 2815 3702 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_287723 k141_287723_3 3726 4085 + Response_reg
TC k141_287723 k141_287723_4 4155 4868 + 9.B.20.1.4
CAZyme k141_287723 k141_287723_5 5036 7345 + GT35
CAZyme k141_287723 k141_287723_6 7407 8120 + GT2
Gene ID: k141_287723_1
Type: TC
Location: 876 - 2255 (+)
Gene ID: k141_287723_2
Type:
Location: 2815 - 3702 (+)
Gene ID: k141_287723_3
Type: STP
Location: 3726 - 4085 (+)
Gene ID: k141_287723_4
Type: TC
Location: 4155 - 4868 (+)
Gene ID: k141_287723_5
Type: CAZyme
Location: 5036 - 7345 (+)
Gene ID: k141_287723_6
Type: CAZyme
Location: 7407 - 8120 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_287723_1 vegetarian > vegan 1.26078 0.00266
k141_287723_2 vegetarian > omnivore 1.43279 0.00567
k141_287723_2 vegetarian > vegan 1.20756 0.00266
k141_287723_3 vegetarian > omnivore 1.28287 0.00567
k141_287723_3 vegetarian > vegan 1.57386 0.00266
k141_287723_4 vegetarian > vegan 1.60730 0.00266
k141_287723_6 vegetarian > vegan 1.91585 0.00266

🧭 Explore Read Mapping of CGC

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