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Cluster: BF162_bin.9_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_487865 k141_487865_55 70310 70540 + 3.D.1.6.3
pfam k141_487865 k141_487865_56 70657 71352 + dsrm | Ribonuclease_3 | Ribonucleas_3_3
pfam k141_487865 k141_487865_57 71370 74930 + SMC_N | SMC_N | SMC_hinge | AAA_15 | AAA_23
TC k141_487865 k141_487865_58 74930 75835 + 3.A.5.1.1
STP k141_487865 k141_487865_59 75810 77033 + ACT | PALP
TC k141_487865 k141_487865_60 77309 78160 + 2.A.115.1.5
CAZyme k141_487865 k141_487865_61 78416 79486 + GH25
Gene ID: k141_487865_55
Type: TC
Location: 70310 - 70540 (+)
Gene ID: k141_487865_56
Type: pfam
Location: 70657 - 71352 (+)
Gene ID: k141_487865_57
Type: pfam
Location: 71370 - 74930 (+)
Gene ID: k141_487865_58
Type: TC
Location: 74930 - 75835 (+)
Gene ID: k141_487865_59
Type: STP
Location: 75810 - 77033 (+)
Gene ID: k141_487865_60
Type: TC
Location: 77309 - 78160 (+)
Gene ID: k141_487865_61
Type: CAZyme
Location: 78416 - 79486 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_487865_55 vegetarian > omnivore 1.40906 0.00567
k141_487865_55 vegetarian > vegan 3.94542 0.00266
k141_487865_56 vegetarian > omnivore 1.01416 0.00567
k141_487865_56 vegetarian > vegan 3.23433 0.00266
k141_487865_60 vegetarian > vegan 1.53855 0.00266
k141_487865_61 vegetarian > vegan 1.45858 0.00266

🧭 Explore Read Mapping of CGC

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