dbCAN HGM

Cluster: BF162_bin.9_CGC29

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	k141_86845	k141_86845_88	92838	95261	+	GH3
CAZyme	k141_86845	k141_86845_89	95346	96893	-	GH13_44
TF	k141_86845	k141_86845_90	97059	97928	+	HTH_AraC \| HTH_AraC
TC	k141_86845	k141_86845_91	97932	99767	+	3.A.16.1.2
TF	k141_86845	k141_86845_92	99832	101457	+	HTH_AraC \| HTH_AraC
TC	k141_86845	k141_86845_93	101488	103275	+	8.A.59.2.1
STP	k141_86845	k141_86845_94	103292	104560	+	SBP_bac_1
TC	k141_86845	k141_86845_95	104751	106151	+	3.A.1.1.45
TC	k141_86845	k141_86845_96	106221	107072	+	3.A.1.1.45
TC	k141_86845	k141_86845_97	107072	107914	+	3.A.1.1.45
CAZyme	k141_86845	k141_86845_98	107941	110211	+	GT35

Gene ID: k141_86845_88
Type: CAZyme
Location: 92838 - 95261 (+)

Gene ID: k141_86845_89
Type: CAZyme
Location: 95346 - 96893 (-)

Gene ID: k141_86845_90
Type: TF
Location: 97059 - 97928 (+)

Gene ID: k141_86845_91
Type: TC
Location: 97932 - 99767 (+)

Gene ID: k141_86845_92
Type: TF
Location: 99832 - 101457 (+)

Gene ID: k141_86845_93
Type: TC
Location: 101488 - 103275 (+)

Gene ID: k141_86845_94
Type: STP
Location: 103292 - 104560 (+)

Gene ID: k141_86845_95
Type: TC
Location: 104751 - 106151 (+)

Gene ID: k141_86845_96
Type: TC
Location: 106221 - 107072 (+)

Gene ID: k141_86845_97
Type: TC
Location: 107072 - 107914 (+)

Gene ID: k141_86845_98
Type: CAZyme
Location: 107941 - 110211 (+)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
k141_86845_88	vegetarian > vegan	2.01360	0.00266
k141_86845_90	vegetarian > omnivore	1.29707	0.00567
k141_86845_90	vegetarian > vegan	2.77009	0.00266
k141_86845_92	vegetarian > vegan	1.48149	0.00266
k141_86845_94	vegetarian > omnivore	1.37656	0.00567
k141_86845_94	vegetarian > vegan	1.33612	0.00266