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Cluster: BF162_bin.9_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_422063 k141_422063_7 6002 6934 - 3.A.1.1.29
TC k141_422063 k141_422063_8 6953 7858 - 3.A.1.1.29
TF k141_422063 k141_422063_9 7992 9065 - LacI
CAZyme k141_422063 k141_422063_10 9483 11918 + GH94
STP k141_422063 k141_422063_11 12034 12897 - PfkB
TC k141_422063 k141_422063_12 13181 13597 - 1.A.22.1.1
Gene ID: k141_422063_7
Type: TC
Location: 6002 - 6934 (-)
Gene ID: k141_422063_8
Type: TC
Location: 6953 - 7858 (-)
Gene ID: k141_422063_9
Type: TF
Location: 7992 - 9065 (-)
Gene ID: k141_422063_10
Type: CAZyme
Location: 9483 - 11918 (+)
Gene ID: k141_422063_11
Type: STP
Location: 12034 - 12897 (-)
Gene ID: k141_422063_12
Type: TC
Location: 13181 - 13597 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_422063_9 vegetarian > omnivore 1.02972 0.00567
k141_422063_9 vegetarian > vegan 1.63553 0.00266
k141_422063_11 vegetarian > omnivore 1.75679 0.00567
k141_422063_11 vegetarian > vegan 2.48789 0.00266
k141_422063_12 vegetarian > vegan 1.83997 0.00266

🧭 Explore Read Mapping of CGC

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