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Cluster: BF162_bin.9_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_201232 k141_201232_27 33448 36036 + GH2
TC k141_201232 k141_201232_28 36139 37575 + 2.A.2.1.1
CAZyme k141_201232 k141_201232_29 37572 39956 + GH36
pfam k141_201232 k141_201232_30 40015 40473 + Coat_F
CAZyme k141_201232 k141_201232_31 40694 41722 + GH172
CAZyme k141_201232 k141_201232_32 41768 43303 + GH32
STP k141_201232 k141_201232_33 43405 44526 + GGDEF
TC k141_201232 k141_201232_34 44554 45726 + 1.A.1.24.5
Gene ID: k141_201232_27
Type: CAZyme
Location: 33448 - 36036 (+)
Gene ID: k141_201232_28
Type: TC
Location: 36139 - 37575 (+)
Gene ID: k141_201232_29
Type: CAZyme
Location: 37572 - 39956 (+)
Gene ID: k141_201232_30
Type: pfam
Location: 40015 - 40473 (+)
Gene ID: k141_201232_31
Type: CAZyme
Location: 40694 - 41722 (+)
Gene ID: k141_201232_32
Type: CAZyme
Location: 41768 - 43303 (+)
Gene ID: k141_201232_33
Type: STP
Location: 43405 - 44526 (+)
Gene ID: k141_201232_34
Type: TC
Location: 44554 - 45726 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_201232_27 vegetarian > omnivore 1.24325 0.00567
k141_201232_27 vegetarian > vegan 1.47375 0.00266
k141_201232_29 vegetarian > omnivore 1.35378 0.00567
k141_201232_29 vegetarian > vegan 2.24919 0.00266
k141_201232_30 vegetarian > omnivore 1.25496 0.00567
k141_201232_30 vegetarian > vegan 2.87286 0.00266
k141_201232_32 vegetarian > vegan 1.77395 0.00266
k141_201232_34 vegetarian > vegan 1.03845 0.00266

🧭 Explore Read Mapping of CGC

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