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Cluster: BF162_bin.9_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_93238 k141_93238_34 35085 36917 + GH146
TF k141_93238 k141_93238_35 36931 37797 - HTH_AraC | HTH_AraC
pfam k141_93238 k141_93238_36 37869 38486 - Flavodoxin_2 | FMN_red
TC k141_93238 k141_93238_37 38654 39817 - 2.A.1.60.3
TC k141_93238 k141_93238_38 39977 41356 + 2.A.66.1.28
Gene ID: k141_93238_34
Type: CAZyme
Location: 35085 - 36917 (+)
Gene ID: k141_93238_35
Type: TF
Location: 36931 - 37797 (-)
Gene ID: k141_93238_36
Type: pfam
Location: 37869 - 38486 (-)
Gene ID: k141_93238_37
Type: TC
Location: 38654 - 39817 (-)
Gene ID: k141_93238_38
Type: TC
Location: 39977 - 41356 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_93238_34 vegetarian > vegan 2.44309 0.00266
k141_93238_35 vegetarian > vegan 2.17241 0.00266
k141_93238_37 vegetarian > omnivore 1.24440 0.00567
k141_93238_37 vegetarian > vegan 1.26326 0.00266
k141_93238_38 vegetarian > vegan 1.61334 0.00266

🧭 Explore Read Mapping of CGC

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