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Cluster: BF162_bin.9_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_324982 k141_324982_35 32819 33709 - 3.A.1.1.29
TC k141_324982 k141_324982_36 33720 34658 - 3.A.1.1.10
pfam k141_324982 k141_324982_37 34789 36441 - DUF3502
TF k141_324982 k141_324982_38 36700 37758 - LacI
TC k141_324982 k141_324982_39 38016 39005 - 8.A.5.1.3
CAZyme k141_324982 k141_324982_40 39429 41984 + GH9
Gene ID: k141_324982_35
Type: TC
Location: 32819 - 33709 (-)
Gene ID: k141_324982_36
Type: TC
Location: 33720 - 34658 (-)
Gene ID: k141_324982_37
Type: pfam
Location: 34789 - 36441 (-)
Gene ID: k141_324982_38
Type: TF
Location: 36700 - 37758 (-)
Gene ID: k141_324982_39
Type: TC
Location: 38016 - 39005 (-)
Gene ID: k141_324982_40
Type: CAZyme
Location: 39429 - 41984 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_324982_40 vegetarian > vegan 1.84370 0.00266

🧭 Explore Read Mapping of CGC

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