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Cluster: BF153_bin.72_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_469125 k141_469125_9 10359 11672 + GH13_20
pfam k141_469125 k141_469125_10 11694 13043 + FGGY_N | FGGY_C
pfam k141_469125 k141_469125_11 13105 14124 - adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | NAD_binding_10 | GDP_Man_Dehyd
TC k141_469125 k141_469125_12 14244 17366 - 2.A.6.3.6
Gene ID: k141_469125_9
Type: CAZyme
Location: 10359 - 11672 (+)
Gene ID: k141_469125_10
Type: pfam
Location: 11694 - 13043 (+)
Gene ID: k141_469125_11
Type: pfam
Location: 13105 - 14124 (-)
Gene ID: k141_469125_12
Type: TC
Location: 14244 - 17366 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_469125_11 vegan > omnivore 1.18378 0.00566

🧭 Explore Read Mapping of CGC

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