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Cluster: BF153_102_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_5620 k141_5620_9 12110 12808 - CE4
pfam k141_5620 k141_5620_10 12817 14700 - Glyco_hydro_42
TC k141_5620 k141_5620_11 14708 16321 - 3.A.1.1.10
TC k141_5620 k141_5620_12 16454 17356 - 3.A.1.1.29
TC k141_5620 k141_5620_13 17374 18333 - 3.A.1.1.10
CAZyme k141_5620 k141_5620_14 18496 19350 + CE4
CAZyme k141_5620 k141_5620_15 19398 20762 - GH1
CAZyme k141_5620 k141_5620_16 20966 23404 + GH94
CAZyme k141_5620 k141_5620_17 23401 25587 + GH36
Gene ID: k141_5620_9
Type: CAZyme
Location: 12110 - 12808 (-)
Gene ID: k141_5620_10
Type: pfam
Location: 12817 - 14700 (-)
Gene ID: k141_5620_11
Type: TC
Location: 14708 - 16321 (-)
Gene ID: k141_5620_12
Type: TC
Location: 16454 - 17356 (-)
Gene ID: k141_5620_13
Type: TC
Location: 17374 - 18333 (-)
Gene ID: k141_5620_14
Type: CAZyme
Location: 18496 - 19350 (+)
Gene ID: k141_5620_15
Type: CAZyme
Location: 19398 - 20762 (-)
Gene ID: k141_5620_16
Type: CAZyme
Location: 20966 - 23404 (+)
Gene ID: k141_5620_17
Type: CAZyme
Location: 23401 - 25587 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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