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Cluster: BF153_102_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_433959 k141_433959_17 19890 21758 - 3.D.1.5.1
TC k141_433959 k141_433959_18 21758 22246 - 3.D.1.6.4
pfam k141_433959 k141_433959_19 22584 24035 + MatE
CAZyme k141_433959 k141_433959_20 24241 25470 - GH109
CAZyme k141_433959 k141_433959_21 25528 26745 - GH37
NULL(UNKNOWN) k141_433959 k141_433959_22 26742 28733 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_433959 k141_433959_23 28744 30003 - GH109
CAZyme k141_433959 k141_433959_24 29996 32488 - GH106
TC k141_433959 k141_433959_25 32492 33373 - 3.A.1.1.18
pfam k141_433959 k141_433959_26 33370 34314 - BPD_transp_1
STP k141_433959 k141_433959_27 34414 35769 - SBP_bac_1
CAZyme k141_433959 k141_433959_28 35912 40630 - CBM67
Gene ID: k141_433959_17
Type: TC
Location: 19890 - 21758 (-)
Gene ID: k141_433959_18
Type: TC
Location: 21758 - 22246 (-)
Gene ID: k141_433959_19
Type: pfam
Location: 22584 - 24035 (+)
Gene ID: k141_433959_20
Type: CAZyme
Location: 24241 - 25470 (-)
Gene ID: k141_433959_21
Type: CAZyme
Location: 25528 - 26745 (-)
Gene ID: k141_433959_22
Type:
Location: 26742 - 28733 (-)
Gene ID: k141_433959_23
Type: CAZyme
Location: 28744 - 30003 (-)
Gene ID: k141_433959_24
Type: CAZyme
Location: 29996 - 32488 (-)
Gene ID: k141_433959_25
Type: TC
Location: 32492 - 33373 (-)
Gene ID: k141_433959_26
Type: pfam
Location: 33370 - 34314 (-)
Gene ID: k141_433959_27
Type: STP
Location: 34414 - 35769 (-)
Gene ID: k141_433959_28
Type: CAZyme
Location: 35912 - 40630 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_433959_18 vegan > omnivore 2.94950 0.02517

🧭 Explore Read Mapping of CGC

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