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Cluster: BF141_bin.80_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_284363 k141_284363_2 1261 1944 - 3.A.1.24.5
TC k141_284363 k141_284363_3 1945 2727 - 3.A.1.24.1
CAZyme k141_284363 k141_284363_4 3041 4354 + GT4
STP k141_284363 k141_284363_5 4450 5733 + Aminotran_1_2
TC k141_284363 k141_284363_6 5733 6335 + 9.B.18.1.2
pfam k141_284363 k141_284363_7 6563 7606 - tRNA-synt_1b
pfam k141_284363 k141_284363_8 7776 8414 + LUD_dom
TC k141_284363 k141_284363_9 8981 9637 + 2.A.115.2.10
pfam k141_284363 k141_284363_10 9787 12120 - UPF0020 | THUMP | Cons_hypoth95 | Methyltrans_SAM | RlmL_1st
STP k141_284363 k141_284363_11 12205 13458 - Sigma70_r2 | Sigma70_r3 | Sigma70_r4
TC k141_284363 k141_284363_12 13553 16057 - 3.A.11.3.1
Gene ID: k141_284363_2
Type: TC
Location: 1261 - 1944 (-)
Gene ID: k141_284363_3
Type: TC
Location: 1945 - 2727 (-)
Gene ID: k141_284363_4
Type: CAZyme
Location: 3041 - 4354 (+)
Gene ID: k141_284363_5
Type: STP
Location: 4450 - 5733 (+)
Gene ID: k141_284363_6
Type: TC
Location: 5733 - 6335 (+)
Gene ID: k141_284363_7
Type: pfam
Location: 6563 - 7606 (-)
Gene ID: k141_284363_8
Type: pfam
Location: 7776 - 8414 (+)
Gene ID: k141_284363_9
Type: TC
Location: 8981 - 9637 (+)
Gene ID: k141_284363_10
Type: pfam
Location: 9787 - 12120 (-)
Gene ID: k141_284363_11
Type: STP
Location: 12205 - 13458 (-)
Gene ID: k141_284363_12
Type: TC
Location: 13553 - 16057 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_284363_4 vegan > omnivore 2.21007 0.03459
k141_284363_4 vegetarian > omnivore 1.76358 0.00861
k141_284363_5 vegan > omnivore 1.75833 0.03459
k141_284363_5 vegetarian > omnivore 1.81514 0.00861
k141_284363_6 vegan > omnivore 1.05830 0.03459
k141_284363_6 vegetarian > omnivore 1.12430 0.00861
k141_284363_8 vegan > omnivore 2.55662 0.03459
k141_284363_8 vegetarian > omnivore 2.81743 0.00861
k141_284363_9 vegan > omnivore 1.04232 0.03459
k141_284363_10 vegan > omnivore 1.74699 0.03459
k141_284363_10 vegetarian > omnivore 1.45317 0.00861

🧭 Explore Read Mapping of CGC

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