Cluster: BF117_bin.68_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BF117_bin.68
- CGC Family ID: CGCFAM_01635
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12192 | k141_12192_11 | 12773 | 14191 | + | 3.A.1.1.27 |
| TC | k141_12192 | k141_12192_12 | 14193 | 15038 | + | 3.A.1.1.27 |
| NULL(UNKNOWN) | k141_12192 | k141_12192_13 | 15152 | 17002 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_12192 | k141_12192_14 | 16975 | 17193 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_12192 | k141_12192_15 | 17320 | 18429 | + | GH53 |
Gene ID: k141_12192_11
Type: TC
Location: 12773 - 14191 (+)
Type: TC
Location: 12773 - 14191 (+)
Gene ID: k141_12192_12
Type: TC
Location: 14193 - 15038 (+)
Type: TC
Location: 14193 - 15038 (+)
Gene ID: k141_12192_13
Type:
Location: 15152 - 17002 (+)
Type:
Location: 15152 - 17002 (+)
Gene ID: k141_12192_14
Type:
Location: 16975 - 17193 (+)
Type:
Location: 16975 - 17193 (+)
Gene ID: k141_12192_15
Type: CAZyme
Location: 17320 - 18429 (+)
Type: CAZyme
Location: 17320 - 18429 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp001940165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_12192_11 | vegan > omnivore | 1.92056 | 0.04549 |
| k141_12192_11 | vegetarian > omnivore | 2.64829 | 0.00028 |
| k141_12192_12 | vegan > omnivore | 2.32534 | 0.02445 |
| k141_12192_12 | vegetarian > omnivore | 2.29708 | 0.00028 |