Cluster: BF117_bin.68_CGC22
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: BF117_bin.68
- CGC Family ID: CGCFAM_00106
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_438307 | k141_438307_78 | 90317 | 92131 | + | 3.A.16.1.1 |
| NULL(UNKNOWN) | k141_438307 | k141_438307_79 | 92357 | 92839 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_438307 | k141_438307_80 | 93378 | 95510 | + | 1.B.52.2.2 |
| TF | k141_438307 | k141_438307_81 | 95698 | 96729 | - | LacI |
| CAZyme | k141_438307 | k141_438307_82 | 97094 | 98590 | + | GH77 |
| pfam | k141_438307 | k141_438307_83 | 98672 | 99967 | + | SBP_bac_1 | SBP_bac_8 |
| TC | k141_438307 | k141_438307_84 | 100131 | 101504 | + | 3.A.1.1.27 |
| TC | k141_438307 | k141_438307_85 | 101504 | 102385 | + | 3.A.1.1.27 |
| CAZyme | k141_438307 | k141_438307_86 | 102523 | 104262 | + | GH13_36 |
| CAZyme | k141_438307 | k141_438307_87 | 105471 | 107495 | - | GH133 |
| NULL(UNKNOWN) | k141_438307 | k141_438307_88 | 107738 | 108232 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_438307 | k141_438307_89 | 108248 | 109975 | - | GGDEF |
| TC | k141_438307 | k141_438307_90 | 110152 | 110883 | + | 3.A.1.12.10 |
Gene ID: k141_438307_78
Type: TC
Location: 90317 - 92131 (+)
Type: TC
Location: 90317 - 92131 (+)
Gene ID: k141_438307_79
Type:
Location: 92357 - 92839 (-)
Type:
Location: 92357 - 92839 (-)
Gene ID: k141_438307_80
Type: TC
Location: 93378 - 95510 (+)
Type: TC
Location: 93378 - 95510 (+)
Gene ID: k141_438307_81
Type: TF
Location: 95698 - 96729 (-)
Type: TF
Location: 95698 - 96729 (-)
Gene ID: k141_438307_82
Type: CAZyme
Location: 97094 - 98590 (+)
Type: CAZyme
Location: 97094 - 98590 (+)
Gene ID: k141_438307_83
Type: pfam
Location: 98672 - 99967 (+)
Type: pfam
Location: 98672 - 99967 (+)
Gene ID: k141_438307_84
Type: TC
Location: 100131 - 101504 (+)
Type: TC
Location: 100131 - 101504 (+)
Gene ID: k141_438307_85
Type: TC
Location: 101504 - 102385 (+)
Type: TC
Location: 101504 - 102385 (+)
Gene ID: k141_438307_86
Type: CAZyme
Location: 102523 - 104262 (+)
Type: CAZyme
Location: 102523 - 104262 (+)
Gene ID: k141_438307_87
Type: CAZyme
Location: 105471 - 107495 (-)
Type: CAZyme
Location: 105471 - 107495 (-)
Gene ID: k141_438307_88
Type:
Location: 107738 - 108232 (+)
Type:
Location: 107738 - 108232 (+)
Gene ID: k141_438307_89
Type: STP
Location: 108248 - 109975 (-)
Type: STP
Location: 108248 - 109975 (-)
Gene ID: k141_438307_90
Type: TC
Location: 110152 - 110883 (+)
Type: TC
Location: 110152 - 110883 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp001940165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.