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Cluster: BF114_159_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_260623 k141_260623_16 15238 17640 + GH2
NULL(UNKNOWN) k141_260623 k141_260623_17 17694 17834 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_260623 k141_260623_18 17879 18418 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_260623 k141_260623_19 18545 20170 - GH5_19
pfam k141_260623 k141_260623_20 20433 20798 + adh_short
pfam k141_260623 k141_260623_21 20832 21215 + adh_short | adh_short_C2
TC k141_260623 k141_260623_22 21250 21864 - 2.A.115.2.14
pfam k141_260623 k141_260623_23 21972 23000 - SpoIID
pfam k141_260623 k141_260623_24 23168 23467 + Ribosomal_S6
TC k141_260623 k141_260623_25 23471 23923 + 3.A.7.19.1
pfam k141_260623 k141_260623_26 23947 24195 + Ribosomal_S18
pfam k141_260623 k141_260623_27 24225 24674 + ABC_trans_CmpB
CAZyme k141_260623 k141_260623_28 24750 26048 + GH18
CAZyme k141_260623 k141_260623_29 26117 28393 + CE20
Gene ID: k141_260623_16
Type: CAZyme
Location: 15238 - 17640 (+)
Gene ID: k141_260623_17
Type:
Location: 17694 - 17834 (-)
Gene ID: k141_260623_18
Type:
Location: 17879 - 18418 (-)
Gene ID: k141_260623_19
Type: CAZyme
Location: 18545 - 20170 (-)
Gene ID: k141_260623_20
Type: pfam
Location: 20433 - 20798 (+)
Gene ID: k141_260623_21
Type: pfam
Location: 20832 - 21215 (+)
Gene ID: k141_260623_22
Type: TC
Location: 21250 - 21864 (-)
Gene ID: k141_260623_23
Type: pfam
Location: 21972 - 23000 (-)
Gene ID: k141_260623_24
Type: pfam
Location: 23168 - 23467 (+)
Gene ID: k141_260623_25
Type: TC
Location: 23471 - 23923 (+)
Gene ID: k141_260623_26
Type: pfam
Location: 23947 - 24195 (+)
Gene ID: k141_260623_27
Type: pfam
Location: 24225 - 24674 (+)
Gene ID: k141_260623_28
Type: CAZyme
Location: 24750 - 26048 (+)
Gene ID: k141_260623_29
Type: CAZyme
Location: 26117 - 28393 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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