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Cluster: BF112_bin.17_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_198296 k141_198296_1 1 1839 + GH2
pfam k141_198296 k141_198296_2 2430 4052 - SBP_bac_8
TC k141_198296 k141_198296_3 4118 4993 - 3.A.1.1.10
TC k141_198296 k141_198296_4 4993 5967 - 3.A.1.1.10
TF k141_198296 k141_198296_5 6272 7258 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_198296 k141_198296_6 7255 8031 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_198296 k141_198296_7 8034 10805 + GH115
Gene ID: k141_198296_1
Type: CAZyme
Location: 1 - 1839 (+)
Gene ID: k141_198296_2
Type: pfam
Location: 2430 - 4052 (-)
Gene ID: k141_198296_3
Type: TC
Location: 4118 - 4993 (-)
Gene ID: k141_198296_4
Type: TC
Location: 4993 - 5967 (-)
Gene ID: k141_198296_5
Type: TF
Location: 6272 - 7258 (+)
Gene ID: k141_198296_6
Type:
Location: 7255 - 8031 (+)
Gene ID: k141_198296_7
Type: CAZyme
Location: 8034 - 10805 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_198296_1 vegetarian > omnivore 1.11863 0.02071

🧭 Explore Read Mapping of CGC

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