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Cluster: BF112_bin.17_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_254576 k141_254576_2 1214 2071 - 3.A.1.1.2
TC k141_254576 k141_254576_3 2085 3011 - 3.A.1.1.28
STP k141_254576 k141_254576_4 3097 4368 - SBP_bac_1
TC k141_254576 k141_254576_5 4872 6533 - 8.A.59.2.1
pfam k141_254576 k141_254576_6 6889 8301 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_254576 k141_254576_7 8314 10695 - GH94
TF k141_254576 k141_254576_8 10881 11729 - HTH_1
TC k141_254576 k141_254576_9 11904 13652 + 3.A.1.135.5
TC k141_254576 k141_254576_10 13649 15388 + 3.A.1.135.5
STP k141_254576 k141_254576_11 15662 16471 + SBP_bac_3
STP k141_254576 k141_254576_12 16452 19061 + HATPase_c | HisKA | Response_reg
TC k141_254576 k141_254576_13 19146 20195 - 3.A.1.106.12
Gene ID: k141_254576_2
Type: TC
Location: 1214 - 2071 (-)
Gene ID: k141_254576_3
Type: TC
Location: 2085 - 3011 (-)
Gene ID: k141_254576_4
Type: STP
Location: 3097 - 4368 (-)
Gene ID: k141_254576_5
Type: TC
Location: 4872 - 6533 (-)
Gene ID: k141_254576_6
Type: pfam
Location: 6889 - 8301 (-)
Gene ID: k141_254576_7
Type: CAZyme
Location: 8314 - 10695 (-)
Gene ID: k141_254576_8
Type: TF
Location: 10881 - 11729 (-)
Gene ID: k141_254576_9
Type: TC
Location: 11904 - 13652 (+)
Gene ID: k141_254576_10
Type: TC
Location: 13649 - 15388 (+)
Gene ID: k141_254576_11
Type: STP
Location: 15662 - 16471 (+)
Gene ID: k141_254576_12
Type: STP
Location: 16452 - 19061 (+)
Gene ID: k141_254576_13
Type: TC
Location: 19146 - 20195 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_254576_6 vegetarian > omnivore 1.17149 0.00454

🧭 Explore Read Mapping of CGC

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