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Cluster: BF095_bin.17_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_402155 k141_402155_86 99313 101709 + GH31_3
CAZyme k141_402155 k141_402155_87 101674 103917 - GH3
pfam k141_402155 k141_402155_88 104238 106376 + S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
TC k141_402155 k141_402155_89 106799 109378 + 3.A.3.2.21
TC k141_402155 k141_402155_90 109486 110946 + 9.B.10.1.1
pfam k141_402155 k141_402155_91 110966 113395 + tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2
TC k141_402155 k141_402155_92 113720 116293 + 3.A.9.1.2
pfam k141_402155 k141_402155_93 116411 117346 + Mem_trans
NULL(UNKNOWN) k141_402155 k141_402155_94 117379 118269 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_402155 k141_402155_95 118245 120068 + 9.B.33.1.1
TF k141_402155 k141_402155_96 120072 121595 + HTH_AraC | HTH_AraC
TC k141_402155 k141_402155_97 121764 122843 + 3.A.1.2.25
TC k141_402155 k141_402155_98 122980 124494 + 3.A.1.2.23
TC k141_402155 k141_402155_99 124497 125585 + 3.A.1.2.23
TC k141_402155 k141_402155_100 125587 126636 + 3.A.1.2.14
TC k141_402155 k141_402155_101 126823 128067 + 3.A.1.2.14
pfam k141_402155 k141_402155_102 128125 129414 + LRR_5
CAZyme k141_402155 k141_402155_103 129583 131718 + CBM91 | GH43_10
CAZyme k141_402155 k141_402155_104 131958 133475 + GH43_16
Gene ID: k141_402155_86
Type: CAZyme
Location: 99313 - 101709 (+)
Gene ID: k141_402155_87
Type: CAZyme
Location: 101674 - 103917 (-)
Gene ID: k141_402155_88
Type: pfam
Location: 104238 - 106376 (+)
Gene ID: k141_402155_89
Type: TC
Location: 106799 - 109378 (+)
Gene ID: k141_402155_90
Type: TC
Location: 109486 - 110946 (+)
Gene ID: k141_402155_91
Type: pfam
Location: 110966 - 113395 (+)
Gene ID: k141_402155_92
Type: TC
Location: 113720 - 116293 (+)
Gene ID: k141_402155_93
Type: pfam
Location: 116411 - 117346 (+)
Gene ID: k141_402155_94
Type:
Location: 117379 - 118269 (+)
Gene ID: k141_402155_95
Type: TC
Location: 118245 - 120068 (+)
Gene ID: k141_402155_96
Type: TF
Location: 120072 - 121595 (+)
Gene ID: k141_402155_97
Type: TC
Location: 121764 - 122843 (+)
Gene ID: k141_402155_98
Type: TC
Location: 122980 - 124494 (+)
Gene ID: k141_402155_99
Type: TC
Location: 124497 - 125585 (+)
Gene ID: k141_402155_100
Type: TC
Location: 125587 - 126636 (+)
Gene ID: k141_402155_101
Type: TC
Location: 126823 - 128067 (+)
Gene ID: k141_402155_102
Type: pfam
Location: 128125 - 129414 (+)
Gene ID: k141_402155_103
Type: CAZyme
Location: 129583 - 131718 (+)
Gene ID: k141_402155_104
Type: CAZyme
Location: 131958 - 133475 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_402155_97 vegetarian > vegan 1.23431 0.02258

🧭 Explore Read Mapping of CGC

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