Cluster: BF088_33_CGC7
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: BF088_33
- CGC Family ID: CGCFAM_00014
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_69618 | k141_69618_106 | 110165 | 111859 | + | 4.A.3.1.1 |
| pfam | k141_69618 | k141_69618_107 | 112348 | 113580 | - | Fic |
| CAZyme | k141_69618 | k141_69618_108 | 113948 | 115369 | - | GH1 |
| TC | k141_69618 | k141_69618_109 | 115446 | 117203 | - | 4.A.3.1.1 |
| TF | k141_69618 | k141_69618_110 | 117479 | 118489 | + | LacI |
| CAZyme | k141_69618 | k141_69618_111 | 118840 | 120279 | - | GH1 |
| TC | k141_69618 | k141_69618_112 | 120476 | 122251 | - | 4.A.3.1.1 |
| TF | k141_69618 | k141_69618_113 | 122608 | 123612 | + | LacI |
| TC | k141_69618 | k141_69618_114 | 123826 | 124164 | + | 4.A.3.1.2 |
Gene ID: k141_69618_106
Type: TC
Location: 110165 - 111859 (+)
Type: TC
Location: 110165 - 111859 (+)
Gene ID: k141_69618_107
Type: pfam
Location: 112348 - 113580 (-)
Type: pfam
Location: 112348 - 113580 (-)
Gene ID: k141_69618_108
Type: CAZyme
Location: 113948 - 115369 (-)
Type: CAZyme
Location: 113948 - 115369 (-)
Gene ID: k141_69618_109
Type: TC
Location: 115446 - 117203 (-)
Type: TC
Location: 115446 - 117203 (-)
Gene ID: k141_69618_110
Type: TF
Location: 117479 - 118489 (+)
Type: TF
Location: 117479 - 118489 (+)
Gene ID: k141_69618_111
Type: CAZyme
Location: 118840 - 120279 (-)
Type: CAZyme
Location: 118840 - 120279 (-)
Gene ID: k141_69618_112
Type: TC
Location: 120476 - 122251 (-)
Type: TC
Location: 120476 - 122251 (-)
Gene ID: k141_69618_113
Type: TF
Location: 122608 - 123612 (+)
Type: TF
Location: 122608 - 123612 (+)
Gene ID: k141_69618_114
Type: TC
Location: 123826 - 124164 (+)
Type: TC
Location: 123826 - 124164 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.