Cluster: BF088_33_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: BF088_33
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_69618 | k141_69618_88 | 94437 | 94880 | + | 4.A.6.1.16 |
| pfam | k141_69618 | k141_69618_89 | 94880 | 95161 | + | YajC |
| TC | k141_69618 | k141_69618_90 | 95198 | 95680 | + | 4.A.6.1.4 |
| TC | k141_69618 | k141_69618_91 | 95771 | 96571 | + | 4.A.6.1.4 |
| TC | k141_69618 | k141_69618_92 | 96561 | 97643 | + | 4.A.6.1.4 |
| TF | k141_69618 | k141_69618_93 | 97829 | 98560 | + | GntR |
| STP | k141_69618 | k141_69618_94 | 98675 | 99841 | + | SIS | SIS |
| CAZyme | k141_69618 | k141_69618_95 | 99960 | 101129 | + | CE9 |
Gene ID: k141_69618_88
Type: TC
Location: 94437 - 94880 (+)
Type: TC
Location: 94437 - 94880 (+)
Gene ID: k141_69618_89
Type: pfam
Location: 94880 - 95161 (+)
Type: pfam
Location: 94880 - 95161 (+)
Gene ID: k141_69618_90
Type: TC
Location: 95198 - 95680 (+)
Type: TC
Location: 95198 - 95680 (+)
Gene ID: k141_69618_91
Type: TC
Location: 95771 - 96571 (+)
Type: TC
Location: 95771 - 96571 (+)
Gene ID: k141_69618_92
Type: TC
Location: 96561 - 97643 (+)
Type: TC
Location: 96561 - 97643 (+)
Gene ID: k141_69618_93
Type: TF
Location: 97829 - 98560 (+)
Type: TF
Location: 97829 - 98560 (+)
Gene ID: k141_69618_94
Type: STP
Location: 98675 - 99841 (+)
Type: STP
Location: 98675 - 99841 (+)
Gene ID: k141_69618_95
Type: CAZyme
Location: 99960 - 101129 (+)
Type: CAZyme
Location: 99960 - 101129 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_69618_89 | vegan > omnivore | 1.05557 | 0.00863 |