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Cluster: BF069_121_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_131171 k141_131171_1 1 3804 + GT2 | GT4 | GT4
pfam k141_131171 k141_131171_2 3817 4755 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_10 | GDP_Man_Dehyd
pfam k141_131171 k141_131171_3 4843 5418 + dTDP_sugar_isom
TC k141_131171 k141_131171_4 5448 6860 + 3.A.1.104.1
TC k141_131171 k141_131171_5 6873 8165 + 3.A.1.103.6
pfam k141_131171 k141_131171_6 8167 10779 + Amidase_3
CAZyme k141_131171 k141_131171_7 10783 12663 + GH73
pfam k141_131171 k141_131171_8 12681 15107 + Transglut_core | Fn3_assoc | CHB_HEX_C_1
CAZyme k141_131171 k141_131171_9 15215 17641 + GT2 | GT2
NULL(UNKNOWN) k141_131171 k141_131171_10 17701 17904 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_131171 k141_131171_11 17906 19765 + GT2 | GT2
TC k141_131171 k141_131171_12 20134 21552 + 9.B.18.1.2
CAZyme k141_131171 k141_131171_13 21549 22307 + GT2
CAZyme k141_131171 k141_131171_14 22301 23032 + GT2
Gene ID: k141_131171_1
Type: CAZyme
Location: 1 - 3804 (+)
Gene ID: k141_131171_2
Type: pfam
Location: 3817 - 4755 (+)
Gene ID: k141_131171_3
Type: pfam
Location: 4843 - 5418 (+)
Gene ID: k141_131171_4
Type: TC
Location: 5448 - 6860 (+)
Gene ID: k141_131171_5
Type: TC
Location: 6873 - 8165 (+)
Gene ID: k141_131171_6
Type: pfam
Location: 8167 - 10779 (+)
Gene ID: k141_131171_7
Type: CAZyme
Location: 10783 - 12663 (+)
Gene ID: k141_131171_8
Type: pfam
Location: 12681 - 15107 (+)
Gene ID: k141_131171_9
Type: CAZyme
Location: 15215 - 17641 (+)
Gene ID: k141_131171_10
Type:
Location: 17701 - 17904 (+)
Gene ID: k141_131171_11
Type: CAZyme
Location: 17906 - 19765 (+)
Gene ID: k141_131171_12
Type: TC
Location: 20134 - 21552 (+)
Gene ID: k141_131171_13
Type: CAZyme
Location: 21549 - 22307 (+)
Gene ID: k141_131171_14
Type: CAZyme
Location: 22301 - 23032 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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