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Cluster: BF068_bin.35_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_173161 k141_173161_205 230064 233345 + GH25
pfam k141_173161 k141_173161_206 233377 234453 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam k141_173161 k141_173161_207 234554 235423 + NTP_transferase | NTP_transf_3
CAZyme k141_173161 k141_173161_208 235413 236675 + GH25
pfam k141_173161 k141_173161_209 236718 237278 + dTDP_sugar_isom
TC k141_173161 k141_173161_210 237286 238278 + 3.A.1.104.1
TC k141_173161 k141_173161_211 238291 239583 + 3.A.1.103.6
pfam k141_173161 k141_173161_212 239594 241669 + PCMT | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
CAZyme k141_173161 k141_173161_213 241683 243536 + GT2
CAZyme k141_173161 k141_173161_214 243533 245578 + GT2
pfam k141_173161 k141_173161_215 245645 247366 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_173161 k141_173161_216 247370 248782 + GT2
CAZyme k141_173161 k141_173161_217 248779 249747 + GT2
TC k141_173161 k141_173161_218 249837 251243 + 9.B.18.1.1
pfam k141_173161 k141_173161_219 251262 252365 + LytR_cpsA_psr
CAZyme k141_173161 k141_173161_220 252434 253363 + GT2
Gene ID: k141_173161_205
Type: CAZyme
Location: 230064 - 233345 (+)
Gene ID: k141_173161_206
Type: pfam
Location: 233377 - 234453 (+)
Gene ID: k141_173161_207
Type: pfam
Location: 234554 - 235423 (+)
Gene ID: k141_173161_208
Type: CAZyme
Location: 235413 - 236675 (+)
Gene ID: k141_173161_209
Type: pfam
Location: 236718 - 237278 (+)
Gene ID: k141_173161_210
Type: TC
Location: 237286 - 238278 (+)
Gene ID: k141_173161_211
Type: TC
Location: 238291 - 239583 (+)
Gene ID: k141_173161_212
Type: pfam
Location: 239594 - 241669 (+)
Gene ID: k141_173161_213
Type: CAZyme
Location: 241683 - 243536 (+)
Gene ID: k141_173161_214
Type: CAZyme
Location: 243533 - 245578 (+)
Gene ID: k141_173161_215
Type: pfam
Location: 245645 - 247366 (+)
Gene ID: k141_173161_216
Type: CAZyme
Location: 247370 - 248782 (+)
Gene ID: k141_173161_217
Type: CAZyme
Location: 248779 - 249747 (+)
Gene ID: k141_173161_218
Type: TC
Location: 249837 - 251243 (+)
Gene ID: k141_173161_219
Type: pfam
Location: 251262 - 252365 (+)
Gene ID: k141_173161_220
Type: CAZyme
Location: 252434 - 253363 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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