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Cluster: BF068_108_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_114384 k141_114384_166 167949 168881 - CE4
pfam k141_114384 k141_114384_167 168894 169637 - Asp_Glu_race
TF k141_114384 k141_114384_168 169637 170353 - GntR
TC k141_114384 k141_114384_169 170498 171994 + 2.A.39.3.4
peptidase k141_114384 k141_114384_170 172096 173406 + M38.UNW
NULL(UNKNOWN) k141_114384 k141_114384_171 173537 174487 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_114384 k141_114384_172 174600 175892 - 9.B.34.1.3
TF k141_114384 k141_114384_173 176236 177288 + LacI
pfam k141_114384 k141_114384_174 177479 178402 + AP_endonuc_2
CAZyme k141_114384 k141_114384_175 178416 179588 + GH109
Gene ID: k141_114384_166
Type: CAZyme
Location: 167949 - 168881 (-)
Gene ID: k141_114384_167
Type: pfam
Location: 168894 - 169637 (-)
Gene ID: k141_114384_168
Type: TF
Location: 169637 - 170353 (-)
Gene ID: k141_114384_169
Type: TC
Location: 170498 - 171994 (+)
Gene ID: k141_114384_170
Type: peptidase
Location: 172096 - 173406 (+)
Gene ID: k141_114384_171
Type:
Location: 173537 - 174487 (-)
Gene ID: k141_114384_172
Type: TC
Location: 174600 - 175892 (-)
Gene ID: k141_114384_173
Type: TF
Location: 176236 - 177288 (+)
Gene ID: k141_114384_174
Type: pfam
Location: 177479 - 178402 (+)
Gene ID: k141_114384_175
Type: CAZyme
Location: 178416 - 179588 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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