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Cluster: BF068_108_CGC72

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_55421 k141_55421_4 5967 6980 + GH177
pfam k141_55421 k141_55421_5 7022 7906 + AP_endonuc_2
pfam k141_55421 k141_55421_6 7930 8829 + AP_endonuc_2
TC k141_55421 k141_55421_7 9016 10326 - 3.A.1.1.3
TC k141_55421 k141_55421_8 10319 11392 - 3.A.1.1.3
pfam k141_55421 k141_55421_9 11398 12222 - Metallophos | Metallophos_2
TC k141_55421 k141_55421_10 12233 13120 - 3.A.1.1.18
TC k141_55421 k141_55421_11 13110 13982 - 3.A.1.1.11
pfam k141_55421 k141_55421_12 14125 15144 - ADH_zinc_N | AlaDh_PNT_C | ADH_N | ADH_zinc_N_2
TC k141_55421 k141_55421_13 15256 16725 - 2.A.53.3.8
TC k141_55421 k141_55421_14 16722 17402 - 2.A.53.3.8
Gene ID: k141_55421_4
Type: CAZyme
Location: 5967 - 6980 (+)
Gene ID: k141_55421_5
Type: pfam
Location: 7022 - 7906 (+)
Gene ID: k141_55421_6
Type: pfam
Location: 7930 - 8829 (+)
Gene ID: k141_55421_7
Type: TC
Location: 9016 - 10326 (-)
Gene ID: k141_55421_8
Type: TC
Location: 10319 - 11392 (-)
Gene ID: k141_55421_9
Type: pfam
Location: 11398 - 12222 (-)
Gene ID: k141_55421_10
Type: TC
Location: 12233 - 13120 (-)
Gene ID: k141_55421_11
Type: TC
Location: 13110 - 13982 (-)
Gene ID: k141_55421_12
Type: pfam
Location: 14125 - 15144 (-)
Gene ID: k141_55421_13
Type: TC
Location: 15256 - 16725 (-)
Gene ID: k141_55421_14
Type: TC
Location: 16722 - 17402 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_55421_5 vegan > omnivore 1.79005 0.01678
k141_55421_5 vegetarian > omnivore 1.84219 0.03781
k141_55421_6 vegetarian > omnivore 1.55030 0.03781
k141_55421_6 vegetarian > vegan 2.37028 0.01791

🧭 Explore Read Mapping of CGC

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