Cluster: BF068_108_CGC59
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: BF068_108
- CGC Family ID: CGCFAM_00473
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_63483 | k141_63483_197 | 229134 | 230129 | + | 9.B.97.1.1 |
| TC | k141_63483 | k141_63483_198 | 230158 | 230529 | - | 9.B.44.1.1 |
| pfam | k141_63483 | k141_63483_199 | 230696 | 232150 | - | FGGY_N | FGGY_C |
| NULL(UNKNOWN) | k141_63483 | k141_63483_200 | 232243 | 233565 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_63483 | k141_63483_201 | 234061 | 235056 | + | 3.A.1.2.4 |
| TC | k141_63483 | k141_63483_202 | 235120 | 236661 | + | 3.A.1.2.4 |
| TC | k141_63483 | k141_63483_203 | 236639 | 237820 | + | 3.A.1.2.4 |
| TF | k141_63483 | k141_63483_204 | 238054 | 239232 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_63483 | k141_63483_205 | 239294 | 239857 | - | GH73 |
| CAZyme | k141_63483 | k141_63483_206 | 240425 | 242458 | + | GH13_19 |
| STP | k141_63483 | k141_63483_207 | 242626 | 243882 | + | Aminotran_1_2 |
| TC | k141_63483 | k141_63483_208 | 243925 | 244410 | - | 5.A.3.11.1 |
| TF | k141_63483 | k141_63483_209 | 244521 | 245336 | - | HTH_AraC |
| TC | k141_63483 | k141_63483_210 | 245588 | 246988 | + | 2.A.2.3.6 |
| CAZyme | k141_63483 | k141_63483_211 | 246998 | 248947 | + | GH127 |
Gene ID: k141_63483_197
Type: TC
Location: 229134 - 230129 (+)
Type: TC
Location: 229134 - 230129 (+)
Gene ID: k141_63483_198
Type: TC
Location: 230158 - 230529 (-)
Type: TC
Location: 230158 - 230529 (-)
Gene ID: k141_63483_199
Type: pfam
Location: 230696 - 232150 (-)
Type: pfam
Location: 230696 - 232150 (-)
Gene ID: k141_63483_200
Type:
Location: 232243 - 233565 (-)
Type:
Location: 232243 - 233565 (-)
Gene ID: k141_63483_201
Type: TC
Location: 234061 - 235056 (+)
Type: TC
Location: 234061 - 235056 (+)
Gene ID: k141_63483_202
Type: TC
Location: 235120 - 236661 (+)
Type: TC
Location: 235120 - 236661 (+)
Gene ID: k141_63483_203
Type: TC
Location: 236639 - 237820 (+)
Type: TC
Location: 236639 - 237820 (+)
Gene ID: k141_63483_204
Type: TF
Location: 238054 - 239232 (+)
Type: TF
Location: 238054 - 239232 (+)
Gene ID: k141_63483_205
Type: CAZyme
Location: 239294 - 239857 (-)
Type: CAZyme
Location: 239294 - 239857 (-)
Gene ID: k141_63483_206
Type: CAZyme
Location: 240425 - 242458 (+)
Type: CAZyme
Location: 240425 - 242458 (+)
Gene ID: k141_63483_207
Type: STP
Location: 242626 - 243882 (+)
Type: STP
Location: 242626 - 243882 (+)
Gene ID: k141_63483_208
Type: TC
Location: 243925 - 244410 (-)
Type: TC
Location: 243925 - 244410 (-)
Gene ID: k141_63483_209
Type: TF
Location: 244521 - 245336 (-)
Type: TF
Location: 244521 - 245336 (-)
Gene ID: k141_63483_210
Type: TC
Location: 245588 - 246988 (+)
Type: TC
Location: 245588 - 246988 (+)
Gene ID: k141_63483_211
Type: CAZyme
Location: 246998 - 248947 (+)
Type: CAZyme
Location: 246998 - 248947 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella quasipneumoniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_63483_201 | vegetarian > vegan | 2.12460 | 0.01743 |
| k141_63483_203 | vegetarian > omnivore | 1.63486 | 0.03385 |