Cluster: BF068_108_CGC55
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: BF068_108
- CGC Family ID: CGCFAM_00123
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_63483 | k141_63483_62 | 60038 | 61354 | + | 2.A.8.1.4 |
| CAZyme | k141_63483 | k141_63483_63 | 61457 | 63550 | - | GH77 |
| CAZyme | k141_63483 | k141_63483_64 | 63561 | 65951 | - | GT35 |
| TF | k141_63483 | k141_63483_65 | 66576 | 69281 | + | GerE |
| TF | k141_63483 | k141_63483_66 | 69297 | 70055 | - | HTH_DeoR |
| TC | k141_63483 | k141_63483_67 | 70105 | 70929 | - | 9.B.104.1.1 |
| STP | k141_63483 | k141_63483_68 | 70986 | 71315 | - | Rhodanese |
| pfam | k141_63483 | k141_63483_69 | 71520 | 73028 | + | DAO | DAO_C |
| CAZyme | k141_63483 | k141_63483_70 | 73118 | 75565 | - | GT35 |
| CAZyme | k141_63483 | k141_63483_71 | 75583 | 77016 | - | GT5 |
| pfam | k141_63483 | k141_63483_72 | 77016 | 78311 | - | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | k141_63483 | k141_63483_73 | 78391 | 80367 | - | CBM48 | GH13_11 |
| CAZyme | k141_63483 | k141_63483_74 | 80364 | 82550 | - | CBM48 | GH13_9 |
| pfam | k141_63483 | k141_63483_75 | 82788 | 83894 | - | Semialdhyde_dh | Semialdhyde_dhC |
| TC | k141_63483 | k141_63483_76 | 84357 | 85622 | - | 2.A.8.1.8 |
Gene ID: k141_63483_62
Type: TC
Location: 60038 - 61354 (+)
Type: TC
Location: 60038 - 61354 (+)
Gene ID: k141_63483_63
Type: CAZyme
Location: 61457 - 63550 (-)
Type: CAZyme
Location: 61457 - 63550 (-)
Gene ID: k141_63483_64
Type: CAZyme
Location: 63561 - 65951 (-)
Type: CAZyme
Location: 63561 - 65951 (-)
Gene ID: k141_63483_65
Type: TF
Location: 66576 - 69281 (+)
Type: TF
Location: 66576 - 69281 (+)
Gene ID: k141_63483_66
Type: TF
Location: 69297 - 70055 (-)
Type: TF
Location: 69297 - 70055 (-)
Gene ID: k141_63483_67
Type: TC
Location: 70105 - 70929 (-)
Type: TC
Location: 70105 - 70929 (-)
Gene ID: k141_63483_68
Type: STP
Location: 70986 - 71315 (-)
Type: STP
Location: 70986 - 71315 (-)
Gene ID: k141_63483_69
Type: pfam
Location: 71520 - 73028 (+)
Type: pfam
Location: 71520 - 73028 (+)
Gene ID: k141_63483_70
Type: CAZyme
Location: 73118 - 75565 (-)
Type: CAZyme
Location: 73118 - 75565 (-)
Gene ID: k141_63483_71
Type: CAZyme
Location: 75583 - 77016 (-)
Type: CAZyme
Location: 75583 - 77016 (-)
Gene ID: k141_63483_72
Type: pfam
Location: 77016 - 78311 (-)
Type: pfam
Location: 77016 - 78311 (-)
Gene ID: k141_63483_73
Type: CAZyme
Location: 78391 - 80367 (-)
Type: CAZyme
Location: 78391 - 80367 (-)
Gene ID: k141_63483_74
Type: CAZyme
Location: 80364 - 82550 (-)
Type: CAZyme
Location: 80364 - 82550 (-)
Gene ID: k141_63483_75
Type: pfam
Location: 82788 - 83894 (-)
Type: pfam
Location: 82788 - 83894 (-)
Gene ID: k141_63483_76
Type: TC
Location: 84357 - 85622 (-)
Type: TC
Location: 84357 - 85622 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella quasipneumoniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_63483_68 | vegetarian > vegan | 1.30653 | 0.01791 |
| k141_63483_73 | vegetarian > vegan | 1.58687 | 0.01791 |