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Cluster: BF068_108_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_119789 k141_119789_142 151024 153513 + 1.B.55.1.1
CAZyme k141_119789 k141_119789_143 153522 155537 + CE4 | GH153
CAZyme k141_119789 k141_119789_144 155530 156861 + GT2
pfam k141_119789 k141_119789_145 156858 157307 + PgaD
pfam k141_119789 k141_119789_146 157355 158140 - DSBA | Thioredoxin_4 | ScsC_N
TC k141_119789 k141_119789_147 158366 159049 + 2.A.109.1.5
Gene ID: k141_119789_142
Type: TC
Location: 151024 - 153513 (+)
Gene ID: k141_119789_143
Type: CAZyme
Location: 153522 - 155537 (+)
Gene ID: k141_119789_144
Type: CAZyme
Location: 155530 - 156861 (+)
Gene ID: k141_119789_145
Type: pfam
Location: 156858 - 157307 (+)
Gene ID: k141_119789_146
Type: pfam
Location: 157355 - 158140 (-)
Gene ID: k141_119789_147
Type: TC
Location: 158366 - 159049 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_119789_144 vegetarian > omnivore 3.34898 0.01479
k141_119789_144 vegetarian > vegan 2.00100 0.01791

🧭 Explore Read Mapping of CGC

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