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Cluster: BF068_108_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_81669 k141_81669_27 27344 28744 - GH1
CAZyme k141_81669 k141_81669_28 28796 30988 - CBM35 | GH5_41
pfam k141_81669 k141_81669_29 31001 32338 - LamB
TC k141_81669 k141_81669_30 32601 33974 - 4.A.3.2.6
TC k141_81669 k141_81669_31 34050 34364 + 4.A.3.2.6
TC k141_81669 k141_81669_32 34374 35696 + 4.A.3.2.6
TC k141_81669 k141_81669_33 35720 36034 + 4.A.3.2.7
pfam k141_81669 k141_81669_34 36085 36999 + ROK
TF k141_81669 k141_81669_35 37116 38018 + LacI
TC k141_81669 k141_81669_36 38198 39115 + 3.A.1.15.7
TC k141_81669 k141_81669_37 39112 39933 + 3.A.1.15.7
TC k141_81669 k141_81669_38 39930 40778 + 3.A.1.15.7
TC k141_81669 k141_81669_39 40772 41626 + 3.A.1.15.7
pfam k141_81669 k141_81669_40 41696 42037 - YgbA_NO
pfam k141_81669 k141_81669_41 42115 42408 - Rdx
TC k141_81669 k141_81669_42 42624 44987 + 1.B.14.2.7
pfam k141_81669 k141_81669_43 45058 46089 + HemS | HemS | ChuX_HutX | ChuX_HutX
TC k141_81669 k141_81669_44 46086 46904 + 3.A.1.14.16
TC k141_81669 k141_81669_45 46904 47899 + 3.A.1.14.5
TC k141_81669 k141_81669_46 47892 48671 + 3.A.1.14.16
pfam k141_81669 k141_81669_47 48825 51386 + MutS_V | MutS_I | MutS_II | MutS_IV | MutS_III
TC k141_81669 k141_81669_48 51514 51666 - 1.E.53.1.6
Gene ID: k141_81669_27
Type: CAZyme
Location: 27344 - 28744 (-)
Gene ID: k141_81669_28
Type: CAZyme
Location: 28796 - 30988 (-)
Gene ID: k141_81669_29
Type: pfam
Location: 31001 - 32338 (-)
Gene ID: k141_81669_30
Type: TC
Location: 32601 - 33974 (-)
Gene ID: k141_81669_31
Type: TC
Location: 34050 - 34364 (+)
Gene ID: k141_81669_32
Type: TC
Location: 34374 - 35696 (+)
Gene ID: k141_81669_33
Type: TC
Location: 35720 - 36034 (+)
Gene ID: k141_81669_34
Type: pfam
Location: 36085 - 36999 (+)
Gene ID: k141_81669_35
Type: TF
Location: 37116 - 38018 (+)
Gene ID: k141_81669_36
Type: TC
Location: 38198 - 39115 (+)
Gene ID: k141_81669_37
Type: TC
Location: 39112 - 39933 (+)
Gene ID: k141_81669_38
Type: TC
Location: 39930 - 40778 (+)
Gene ID: k141_81669_39
Type: TC
Location: 40772 - 41626 (+)
Gene ID: k141_81669_40
Type: pfam
Location: 41696 - 42037 (-)
Gene ID: k141_81669_41
Type: pfam
Location: 42115 - 42408 (-)
Gene ID: k141_81669_42
Type: TC
Location: 42624 - 44987 (+)
Gene ID: k141_81669_43
Type: pfam
Location: 45058 - 46089 (+)
Gene ID: k141_81669_44
Type: TC
Location: 46086 - 46904 (+)
Gene ID: k141_81669_45
Type: TC
Location: 46904 - 47899 (+)
Gene ID: k141_81669_46
Type: TC
Location: 47892 - 48671 (+)
Gene ID: k141_81669_47
Type: pfam
Location: 48825 - 51386 (+)
Gene ID: k141_81669_48
Type: TC
Location: 51514 - 51666 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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