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Cluster: BF068_108_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_114384 k141_114384_258 268259 269227 - 3.A.1.20.3
TC k141_114384 k141_114384_259 269224 269925 - 3.A.1.1.38
pfam k141_114384 k141_114384_260 270140 270721 + Flavin_Reduct
TF k141_114384 k141_114384_261 270778 271602 - HTH_AraC
CAZyme k141_114384 k141_114384_262 271807 273375 + GH78
TC k141_114384 k141_114384_263 273399 274781 + 2.A.2.3.3
TC k141_114384 k141_114384_264 274825 276429 + 1.B.3.1.2
Gene ID: k141_114384_258
Type: TC
Location: 268259 - 269227 (-)
Gene ID: k141_114384_259
Type: TC
Location: 269224 - 269925 (-)
Gene ID: k141_114384_260
Type: pfam
Location: 270140 - 270721 (+)
Gene ID: k141_114384_261
Type: TF
Location: 270778 - 271602 (-)
Gene ID: k141_114384_262
Type: CAZyme
Location: 271807 - 273375 (+)
Gene ID: k141_114384_263
Type: TC
Location: 273399 - 274781 (+)
Gene ID: k141_114384_264
Type: TC
Location: 274825 - 276429 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_114384_260 vegetarian > omnivore 2.74095 0.03781
k141_114384_260 vegetarian > vegan 1.66727 0.03515

🧭 Explore Read Mapping of CGC

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