Cluster: BF062_maxbin.009_sub_CGC28
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: BF062_maxbin.009_sub
- CGC Family ID: CGCFAM_00056
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_288029 | k141_288029_1 | 2 | 1606 | + | GH43_29 |
| TF | k141_288029 | k141_288029_2 | 1858 | 2553 | + | Trans_reg_C |
| STP | k141_288029 | k141_288029_3 | 2550 | 3908 | + | HATPase_c | HisKA | PAS |
| TC | k141_288029 | k141_288029_4 | 3990 | 5768 | + | 2.A.58.2.2 |
| NULL(UNKNOWN) | k141_288029 | k141_288029_5 | 5818 | 6666 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_288029 | k141_288029_6 | 6768 | 7361 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_288029 | k141_288029_7 | 7474 | 8388 | - | 3.D.6.1.2 |
| TC | k141_288029 | k141_288029_8 | 8385 | 9665 | - | 3.D.6.1.2 |
Gene ID: k141_288029_1
Type: CAZyme
Location: 2 - 1606 (+)
Type: CAZyme
Location: 2 - 1606 (+)
Gene ID: k141_288029_2
Type: TF
Location: 1858 - 2553 (+)
Type: TF
Location: 1858 - 2553 (+)
Gene ID: k141_288029_3
Type: STP
Location: 2550 - 3908 (+)
Type: STP
Location: 2550 - 3908 (+)
Gene ID: k141_288029_4
Type: TC
Location: 3990 - 5768 (+)
Type: TC
Location: 3990 - 5768 (+)
Gene ID: k141_288029_5
Type:
Location: 5818 - 6666 (-)
Type:
Location: 5818 - 6666 (-)
Gene ID: k141_288029_6
Type:
Location: 6768 - 7361 (-)
Type:
Location: 6768 - 7361 (-)
Gene ID: k141_288029_7
Type: TC
Location: 7474 - 8388 (-)
Type: TC
Location: 7474 - 8388 (-)
Gene ID: k141_288029_8
Type: TC
Location: 8385 - 9665 (-)
Type: TC
Location: 8385 - 9665 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Firm-04
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.