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Cluster: BF062_maxbin.009_sub_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_207992 k141_207992_63 53406 54509 - GH124
pfam k141_207992 k141_207992_64 54538 55554 - Sua5_yciO_yrdC | Sua5_C
pfam k141_207992 k141_207992_65 55573 56661 - RF-1 | PCRF
CAZyme k141_207992 k141_207992_66 56977 58473 + GH25
NULL(UNKNOWN) k141_207992 k141_207992_67 58495 58788 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_207992 k141_207992_68 58810 59517 + 3.A.1.147.2
NULL(UNKNOWN) k141_207992 k141_207992_69 59510 61081 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_207992 k141_207992_70 61368 63218 + CBM22 | CE17
pfam k141_207992 k141_207992_71 63382 64608 + Dockerin_1 | Lipase_GDSL | Lipase_GDSL_2
pfam k141_207992 k141_207992_72 64674 65633 - DUF1980_C
TC k141_207992 k141_207992_73 65646 66686 - 9.B.10.1.1
Gene ID: k141_207992_63
Type: CAZyme
Location: 53406 - 54509 (-)
Gene ID: k141_207992_64
Type: pfam
Location: 54538 - 55554 (-)
Gene ID: k141_207992_65
Type: pfam
Location: 55573 - 56661 (-)
Gene ID: k141_207992_66
Type: CAZyme
Location: 56977 - 58473 (+)
Gene ID: k141_207992_67
Type:
Location: 58495 - 58788 (+)
Gene ID: k141_207992_68
Type: TC
Location: 58810 - 59517 (+)
Gene ID: k141_207992_69
Type:
Location: 59510 - 61081 (+)
Gene ID: k141_207992_70
Type: CAZyme
Location: 61368 - 63218 (+)
Gene ID: k141_207992_71
Type: pfam
Location: 63382 - 64608 (+)
Gene ID: k141_207992_72
Type: pfam
Location: 64674 - 65633 (-)
Gene ID: k141_207992_73
Type: TC
Location: 65646 - 66686 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Firm-04
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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