Cluster: BF049_maxbin.004_CGC15
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: BF049_maxbin.004
- CGC Family ID: CGCFAM_00014
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_47955 | k141_47955_11 | 10795 | 11133 | - | 4.A.3.1.2 |
| TF | k141_47955 | k141_47955_12 | 11348 | 12352 | - | LacI |
| TC | k141_47955 | k141_47955_13 | 12708 | 14480 | + | 4.A.3.1.1 |
| CAZyme | k141_47955 | k141_47955_14 | 14547 | 15986 | + | GH1 |
| TF | k141_47955 | k141_47955_15 | 16344 | 17354 | - | LacI |
| TC | k141_47955 | k141_47955_16 | 17629 | 19386 | + | 4.A.3.1.1 |
| CAZyme | k141_47955 | k141_47955_17 | 19461 | 20882 | + | GH1 |
| TF | k141_47955 | k141_47955_18 | 21158 | 21922 | - | HTH_DeoR |
| sulfatase | k141_47955 | k141_47955_19 | 22129 | 23181 | + | S1_4 |
| TC | k141_47955 | k141_47955_20 | 23508 | 23990 | - | 4.A.6.1.5 |
Gene ID: k141_47955_11
Type: TC
Location: 10795 - 11133 (-)
Type: TC
Location: 10795 - 11133 (-)
Gene ID: k141_47955_12
Type: TF
Location: 11348 - 12352 (-)
Type: TF
Location: 11348 - 12352 (-)
Gene ID: k141_47955_13
Type: TC
Location: 12708 - 14480 (+)
Type: TC
Location: 12708 - 14480 (+)
Gene ID: k141_47955_14
Type: CAZyme
Location: 14547 - 15986 (+)
Type: CAZyme
Location: 14547 - 15986 (+)
Gene ID: k141_47955_15
Type: TF
Location: 16344 - 17354 (-)
Type: TF
Location: 16344 - 17354 (-)
Gene ID: k141_47955_16
Type: TC
Location: 17629 - 19386 (+)
Type: TC
Location: 17629 - 19386 (+)
Gene ID: k141_47955_17
Type: CAZyme
Location: 19461 - 20882 (+)
Type: CAZyme
Location: 19461 - 20882 (+)
Gene ID: k141_47955_18
Type: TF
Location: 21158 - 21922 (-)
Type: TF
Location: 21158 - 21922 (-)
Gene ID: k141_47955_19
Type: sulfatase
Location: 22129 - 23181 (+)
Type: sulfatase
Location: 22129 - 23181 (+)
Gene ID: k141_47955_20
Type: TC
Location: 23508 - 23990 (-)
Type: TC
Location: 23508 - 23990 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.