Cluster: BF049_maxbin.004_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: BF049_maxbin.004
- CGC Family ID: CGCFAM_00008
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_241138 | k141_241138_89 | 94985 | 95752 | - | 3.A.1.103.1 |
| TC | k141_241138 | k141_241138_90 | 95764 | 96609 | - | 3.A.1.103.6 |
| CAZyme | k141_241138 | k141_241138_91 | 96771 | 97709 | + | GT81 |
| pfam | k141_241138 | k141_241138_92 | 97716 | 98801 | + | Acyl_transf_3 |
| CAZyme | k141_241138 | k141_241138_93 | 98935 | 100113 | - | GT2 |
| CAZyme | k141_241138 | k141_241138_94 | 100115 | 101230 | - | GT2 |
Gene ID: k141_241138_89
Type: TC
Location: 94985 - 95752 (-)
Type: TC
Location: 94985 - 95752 (-)
Gene ID: k141_241138_90
Type: TC
Location: 95764 - 96609 (-)
Type: TC
Location: 95764 - 96609 (-)
Gene ID: k141_241138_91
Type: CAZyme
Location: 96771 - 97709 (+)
Type: CAZyme
Location: 96771 - 97709 (+)
Gene ID: k141_241138_92
Type: pfam
Location: 97716 - 98801 (+)
Type: pfam
Location: 97716 - 98801 (+)
Gene ID: k141_241138_93
Type: CAZyme
Location: 98935 - 100113 (-)
Type: CAZyme
Location: 98935 - 100113 (-)
Gene ID: k141_241138_94
Type: CAZyme
Location: 100115 - 101230 (-)
Type: CAZyme
Location: 100115 - 101230 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_241138_89 | vegan > omnivore | 1.02493 | 0.01287 |
| k141_241138_89 | vegetarian > omnivore | 1.09884 | 0.00863 |