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Cluster: BF046_68_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_14221 k141_14221_1 132 2093 - GH2
TF k141_14221 k141_14221_2 2203 6237 + HTH_AraC
TC k141_14221 k141_14221_3 6415 9498 + 1.B.14.6.1
TC k141_14221 k141_14221_4 9520 11130 + 8.A.46.1.6
CAZyme k141_14221 k141_14221_5 11209 13560 + GH141
NULL(UNKNOWN) k141_14221 k141_14221_6 13572 15857 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_14221 k141_14221_7 15871 17040 + GH105
TC k141_14221 k141_14221_8 17377 20730 + 9.A.25.1.1
pfam k141_14221 k141_14221_9 20723 23743 - AAA_23 | AAA_29 | SbcC_Walker_B
pfam k141_14221 k141_14221_10 23740 24984 - Metallophos | SbcD_C
CAZyme k141_14221 k141_14221_11 25068 26369 - GH158
Gene ID: k141_14221_1
Type: CAZyme
Location: 132 - 2093 (-)
Gene ID: k141_14221_2
Type: TF
Location: 2203 - 6237 (+)
Gene ID: k141_14221_3
Type: TC
Location: 6415 - 9498 (+)
Gene ID: k141_14221_4
Type: TC
Location: 9520 - 11130 (+)
Gene ID: k141_14221_5
Type: CAZyme
Location: 11209 - 13560 (+)
Gene ID: k141_14221_6
Type:
Location: 13572 - 15857 (+)
Gene ID: k141_14221_7
Type: CAZyme
Location: 15871 - 17040 (+)
Gene ID: k141_14221_8
Type: TC
Location: 17377 - 20730 (+)
Gene ID: k141_14221_9
Type: pfam
Location: 20723 - 23743 (-)
Gene ID: k141_14221_10
Type: pfam
Location: 23740 - 24984 (-)
Gene ID: k141_14221_11
Type: CAZyme
Location: 25068 - 26369 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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